Gene CHU_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1269 
SymbolhisC 
ID4185968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1479960 
End bp1481006 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content40% 
IMG OID638071263 
Producthistidinol phosphate aminotransferase 
Protein accessionYP_677881 
Protein GI110637674 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.346305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTT CATTAGATTC GATTTTAAGG GATAATATTA AGAACGCAAA GCCATATTCT 
TCTGCAAGGG ATGAATATAA AGGGACGGAA GGCATCTTTT TAGATGCAAA TGAAAACCCA
TATGGTTCTG CCATACAAAA GATGGTTAAC CGGTACCCGG ATCCATTACA ACGTGATGTT
AAAACAGCTT TGTCTGCACT TAAAAACGTT TCTGCTGAAC ATATATTCTT TGGAAATGGC
AGTGATGAAC CGATCGATCT ATTGATACGC GCCACCTGTC AGCCTGGTAA AGACAGTATC
CTGATCTTGC CTCCCACATA CGGTATGTAT GAAGTGAGCG CAGGCATTAA CGATGTAGAT
ATTATTTCTG TTCCGCTTAC AAAAGCCTTC GACCTGGATG TTGACGCAAT TCTTGCTGCT
GTAAAGACTC ATACAAAAAT CATTTTCATC TGTTCGCCTA ATAATCCTAC AGGCAATCTG
ATGAGTGAAG ATAAAGTGAA ACGTATTTTA AACGCATTCT CCGGAATTGT TGTGGTGGAT
GAAGCATACA TTGATTTCGC CGATACAAAA GGCTTTGTGC CCTTATTGGA TCAGTATCCG
AATATGGTGG TACTGCAGAC ATTTTCCAAA GCATGGGGAA TGGCAGCGTT GCGTTTAGGT
ACTGCCTTTG CATCCAAAGA AATCGTTTCT GTGCTGAATA AGATCAAGCC GCCATACAAC
ATCAACCTGT TAACGCAGGA AGCAGCATTG GAAGCATTGC AGAATGTTTC TGTGAAAGAT
GAGATGGTGT ACAAAATATT AAAACAGCGG GATTGGTTGC GTGAGGAATT AAGTAAACTT
CCTGTTTGTC TGGAGTTATA TCCGTCCGAC GCGAACTTTA TATTGATGCG TACCGCGGAT
GGGAAAAAAG TGTATGATTA CTTAGTTGAG CATATTGTAA TCACCAGAGA CCGTTCAAAG
ATCATTCTAT GTGAAGGTTG TGTGCGTATT ACAGTAGGTA CAGAGGCGGA AAATAAACGT
TTGCTGGATG TTTTAAAAAC ATATTAA
 
Protein sequence
MAFSLDSILR DNIKNAKPYS SARDEYKGTE GIFLDANENP YGSAIQKMVN RYPDPLQRDV 
KTALSALKNV SAEHIFFGNG SDEPIDLLIR ATCQPGKDSI LILPPTYGMY EVSAGINDVD
IISVPLTKAF DLDVDAILAA VKTHTKIIFI CSPNNPTGNL MSEDKVKRIL NAFSGIVVVD
EAYIDFADTK GFVPLLDQYP NMVVLQTFSK AWGMAALRLG TAFASKEIVS VLNKIKPPYN
INLLTQEAAL EALQNVSVKD EMVYKILKQR DWLREELSKL PVCLELYPSD ANFILMRTAD
GKKVYDYLVE HIVITRDRSK IILCEGCVRI TVGTEAENKR LLDVLKTY