| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1200 |
|---|
| Symbol | |
|---|
| ID | 4185355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1380033 |
|---|
| End bp | 1380653 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638071197 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677815 |
|---|
| Protein GI | 110637608 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000000512562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCCA GTGACTTTAA ACAACTGCAC ATGAAACACT ATGCTTTTCT GCTTCTCACG
CTGCTTGCCA TATGGGGCTG TACATTTGAA ACTCAAACGA AGGAAGAACT TCCGGCAACG
GATAAACATG TGGTAGCATC GAAACTTCCT GTAGTGCAGG AGGAAGATTC GATGATCTAT
GCGGTAAAAG ACATTGATCC GGTCTGGCTG CAGGCTGATT TTGATAGTGC GGACGCTGTT
ATCCTTGATG GCAGTCATGA ACTCATGTAT GATGTTTCAA AAATGGATAC GAAATATACA
CGTTCAGGCA AACGGAAAGT AACGGATGCA CAGCTCACAA CCATCAGCGA AAATCTTTCA
GGGAAGAATC AGCGCAACTA TCTGCCTGCC GATTGTTTTC AGCCGTATCA CGGATTCATC
TTTTATAAAA AAGGAAAAAT AGCCGGCCGG CTTGCTATTT GTTTTTCATG CAGAACGTAT
TTTTCACAAC CGCGAAATTG CGGCAGGATT AATTATGAAG CAACAAAACA AATCTTTCAC
GAGCTCGGTT TGCCAACCTA TGACTGGAAC GATAGTTCCG AAGCACAGAA CCGTGCGCAT
AAATACAGCG ATTATTTTTA A
|
|---|
| Protein sequence | MFSSDFKQLH MKHYAFLLLT LLAIWGCTFE TQTKEELPAT DKHVVASKLP VVQEEDSMIY
AVKDIDPVWL QADFDSADAV ILDGSHELMY DVSKMDTKYT RSGKRKVTDA QLTTISENLS
GKNQRNYLPA DCFQPYHGFI FYKKGKIAGR LAICFSCRTY FSQPRNCGRI NYEATKQIFH
ELGLPTYDWN DSSEAQNRAH KYSDYF
|
|---|
| |