| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1197 |
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| Symbol | tgt |
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| ID | 4185352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1376486 |
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| End bp | 1377616 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638071194 |
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| Product | queuine tRNA-ribosyltransferase (tRNA-guanine transglycosylase) |
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| Protein accession | YP_677812 |
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| Protein GI | 110637605 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.196997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTTATA AAATTGAACA CAATGATATT GGAACCAGTG CGCGGGCTGG TGTAATAACC
ACCGATCACG GAACTTTCGA AACACCTATT TTTATGCCGG TTGGTACAGC TGGTACTGTA
AAGGCGATGC ATCAGCGTGA GCTTGAGCAG GAAGCGGATG CCCCTATCAT TTTAGGGAAT
ACCTATCACT TATATTTACG TCCGGGGCTG AACATTATTG AACAGGCAGG CGGTTTACAT
AAATTTATCG GCTGGAAACG TTCTATCCTC ACAGACAGCG GAGGTTTTCA GGTTTATTCT
TTATCGGGTA TCCGGAAAAT TAACGAGGAA GGGGTAAAGT TCAAATCACA CATCGATGGC
TCGGCACATT TCTTTACGCC GGAAAGTGTG ATGGACATTC AGCGTACCAT TGGCGCAGAT
ATTGTAATGG CCTTTGATGA ATGTACGCCG TACCCGTGCG AATATGAATA TGCGCGCAAG
TCGATGGAAA TGACGCACCG CTGGCTGGGT CGCTGTGTAA CGCGTATGGC AGAGACAGAG
CCGAAGTACG GATATCAGCA GCATCTGTTC CCGATTGTAC AGGGAAGTGT ATATAAAGAC
CTGCGTCTGA AGTCGGCCGA AGTGATTGCT GAAGCAGGCT GTGTGGGAAA TGCCATTGGC
GGGTTGTCGG TGGGTGAACC GGCAGAAGAA ATGTATGCCA TGAGTGAACT GGTTTGTTCG
GTACTGCCCA AAGACAAACC CCGTTATCTG ATGGGGGTAG GCACGCCGGA AAATTTACTG
GAAAATATTG CGCTGGGTAT AGATATGTTT GATTGTGTAA TGCCGACACG TAATGCCCGC
AACGGCATGC TGTTTACTAC ACAGGGCATC ATCAACATCC GTAATAAAAA GTGGGAGAAC
GATTTTACTC CGCTGGATCA GGGCCTAGAT ATTTACCTCA ATGATTATTA TACCAAAGCA
TATGTTCGCC ACCTGGTGCA CAACAATGAA ATGCTGGGTG CGCAGATAGC AACAATACAG
AATATTTCGT TTTACCTGTG GCTCATGCGT GAAGCGCGTA AGCAGATCGT AGCGGGCACG
TTCCGGGAAT GGAAAGAACG TATGGTAAAA CAATGCATGC AACGTTTATA A
|
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| Protein sequence | MFYKIEHNDI GTSARAGVIT TDHGTFETPI FMPVGTAGTV KAMHQRELEQ EADAPIILGN
TYHLYLRPGL NIIEQAGGLH KFIGWKRSIL TDSGGFQVYS LSGIRKINEE GVKFKSHIDG
SAHFFTPESV MDIQRTIGAD IVMAFDECTP YPCEYEYARK SMEMTHRWLG RCVTRMAETE
PKYGYQQHLF PIVQGSVYKD LRLKSAEVIA EAGCVGNAIG GLSVGEPAEE MYAMSELVCS
VLPKDKPRYL MGVGTPENLL ENIALGIDMF DCVMPTRNAR NGMLFTTQGI INIRNKKWEN
DFTPLDQGLD IYLNDYYTKA YVRHLVHNNE MLGAQIATIQ NISFYLWLMR EARKQIVAGT
FREWKERMVK QCMQRL
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