| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1195 |
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| Symbol | rpoE |
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| ID | 4185350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1374323 |
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| End bp | 1374949 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638071192 |
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| Product | RNA polymerase sigma-24 factor |
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| Protein accession | YP_677810 |
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| Protein GI | 110637603 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.336736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGTAA CGAATGACCT TCCCGAAGGA AGAGAGTTTT CAGAAAAAGC CAAGAAGGAC
TTTTTATTAG TAGAAAGAGC TAAGACATCG GGTGATGAGA AAGCGTTTGC CGAATTGATG
TCGCGCTACA AGAAACCTGT CTACCACATG ATCCTGAAAA TGATCCGGAA TGTGGATGAT
GCGGAAGACT TAACGATTGA AGCATTTGCG AAAGCATTTA AGAATTTACA TAAATTCAAT
CCTGACTTTA CCTTCAGTAC CTGGCTGTTC CGTATTGCAA CGAACAACTG TATTGATTTC
ATCCGTCGTA AGAAACTGGT AACAACCAGT ATTTCTTCTA CCTACAAGGA TGATAATGGC
GAACACACCG AAATGGATAT TAAGGACAGT AACTTGACAC CGTTTGAAGA AACCATTAAA
AGTCAGAAGA TCGAAATCAT TCAGGCCATT GTAAGCAAGC TTCCTCCTAA ATATCAAACC
TTAGTGCGTT TGAGATATTT TGAAGAGTAC TCCTACGAAG AGATCGCCGT AGCGATCGAA
GCTCCCCTTG GTACTGTTAA AGCACAGCTG CACCGTGCAC GCGAACTCCT GTTAGACTTA
GTAAAGAACC GTAAGGATTC CATTTAA
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| Protein sequence | MEVTNDLPEG REFSEKAKKD FLLVERAKTS GDEKAFAELM SRYKKPVYHM ILKMIRNVDD
AEDLTIEAFA KAFKNLHKFN PDFTFSTWLF RIATNNCIDF IRRKKLVTTS ISSTYKDDNG
EHTEMDIKDS NLTPFEETIK SQKIEIIQAI VSKLPPKYQT LVRLRYFEEY SYEEIAVAIE
APLGTVKAQL HRARELLLDL VKNRKDSI
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