| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1193 |
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| Symbol | |
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| ID | 4185348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1368153 |
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| End bp | 1373576 |
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| Gene Length | 5424 bp |
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| Protein Length | 1807 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638071190 |
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| Product | hypothetical protein |
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| Protein accession | YP_677808 |
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| Protein GI | 110637601 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0613973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATCCT CTATTAAAAC CCTAACAGCC TGTTGCCTGT TCATGCTGTG CCTGGCGGCC
TGCAGCAAAA AGAATGTCAT TGAAATCAAA GAAACAAACA CGCAGGATGA AGTAGATCTG
CAGCAAAACA TTGTGATCGT TTTTACCGAA GAGATTGCAG GAGACAGCGC GCTGGATACG
TGGACAGCAA ACCCGCTTGT TGTTTTTACA CCTGAAGTAA AAGGGATGTT CAAATGGACG
GCACCAAACG AATTAACCTT CTCGCCTACT ACCGGCTTCG CGGCCAGTAC AGATTATAAA
GCCGTACTCT CGCCGGCACT GGAAACTGAA TCGGGCGATA AAAAAATGAA GCTCGGTGAT
GAAACTTCTT TTGCGTTCCA CACACCTTAC CTGAACCTTA TACAGGTAGG AAATTTCTGG
GCAAAAAAAG AAAGCAACAA ATCGGTGAAC GAAGTACGCA TGGCGTTAAC GTTCAATTAT
AAAATAAACC CTTCCCAGTT AAAAGAACTC TTAAGCATTA GCATCGATGG CAAGCCTGTT
GCGGTTGACA TCTACACAAC AGCCGTAAGC AACACCATTG ACGTGGGGAT TTCGGAAGCG
GCTGTTTCGT ATGACAATAA AAAAGCAGCC ATCCAGATCA AGGCCGGACT GAAATGTGTT
GAAAGCCCGT ACAGCACGGA TAAAGAGATC AGCGTAGAAA CGTTTATCAC CTCCAAATCT
GATTTCCAGA TCACGGGTGT AACCGCTGAA TATACAGACA AAGACGGCTA CATCAATGTA
GTTACCAACC AGGAGATCAC AACCGATCAG ATCCAGTCGT TGATTGTACT GGAGCCGGAT
CTTCCGGTCA CCATTGAAAA ACAGACCAGC GGTTTCTACA TCAAAGGAAA TTTCAATTCC
GGAGAAGGCT ATGAACTGAC GATCAAAAAA GAACTGACCG GCATTTTCGG CGGAACGTTA
AAAAGTGATT TCACCGAAAC CATTTTATTC GGCACACCGA AACCTGCCAT CAGCTTTGTA
TCTCAGAAAG GCGTTTACCT CAGCAGCAAA GGAAACAAAA ACATAGCCGT GCGCATCATC
AACGTACCTA AGGTAAAAGT AACCGTGTAC AAGGTGTATG CAAACAACGT GTTATCGTTC
TTCCGCAACA ACAGCATCGG CAATTACGAG TACTATGACG ACGAGGAATA TTATTACAGC
GATTACGGCA CCTCGTACTA CGGACTGGAA GACATTGGTG ATGTTGTATA CACCAAAGAA
ATTGAAACAA AGAATTTAAA GAAAGTAAAC GGAACACCGT TACTGAATCT GAACTTCAAT
GACATTAATC AGTTTAAAGG TATTTACATT GTAAAAGTAA CCTCTACCGA AGACCAGTGG
CTGCGCGACT CCAAGTTCGT TTCCATTTCT GATATCGGGC TGATTGCCAA ACAGGGGAAA
GATGACATGC TCATCATGAC CAATTCCATT CTTACAAACG AAGCCATCAG CGGTGTGGAA
ATCAACCTCA TCAGCCACAA CAACCAGACG GTGTACACAA CCAAAACAGA CGGCAGCGGT
GTGATCCACA TTACCGACCT GAAGAACAAG ATCCGGAATT TTAATGTACG CATGATCACC
GCAACAAACG GCAGTGATTT CAACTTCCTG CATTTCAATC AGAGTTATGT AGAAAATACC
GAATACGAAA CGGGTGGTTC AAAAGAAAAT GAAACCGGTT ACGATGCCTT TATCTACGGC
GACAGAGAGA TCTACCGCCC GGGTGAAACG GTATACATCA ACAACGTGGT GCGTGATGTA
CAGTGGCAGG TATTAAAAAA TGTACCTGTA AAAGTGAAGG TATTGCTGCC GAACGGAAAA
GACTTCCAGA ATATCCGCGG TACCTTAAAC GAACAGGGCG CATTCGCTAC TTCGTTCAAA
CTGCCTGAAT CAACGGTAAC CGGCACCTAT TCCATTGAGT TGTACACCTC TACCAATGTA
TTGCTGAACG CGGTTAATAT CAGTGTGGAA GAGTTCATGC CAGACCGCAT TAAAGTTACT
TCTACGGTAA ACAAAGAGGC GCTGAGTCTT TCCGAACCGC TCACGGTGAA CATACAGGCG
ATGAACTTAT TCGGCCCGCC GGCATCCAAC AGAAACTACG AAGCGGAATT ATCGCTGAGC
CGCAAATATT TCAGCGCAGC CAAATACCCG AATTATGATT TCGGTATCAA CGCTTCTTCC
TATAACGAAT TCCAGAATGA AGTACGAGAA GGCACCACCG ATGCAGAAGG CAAAGGCAAA
CAGGATTTCA CCTTCTCTGC GGCCTATAAA AACTGCGGCG TACTGCAGGG CAAGATCTTT
ACTACGGTGT TTGACGAATC CGGCAGGCCG GTACACCAGG TAAACCGCTT TGATGTGTAT
ACACAGGAAA CGTTCTTCGG TATTCAGTAT ACCGATAATT ATGTAAACAC CAACCAGGCA
TTCTCCATTC CGCTGATTGC GGTGAACCGC GCCGGGGAAG CCGTTGCGGC TTCTGCCCGT
GTGGAAGTGA TCAAGTACGA CTGGCAGACG GTGATGCAGC GCACGTATGG AGACGACTAC
CGGTATGTAT CGCAGCGCAA GGTGCGTGTG ATGGAAAATA AAACCATCTC GATCAGCCGG
CCGGGACAGC CATTCATCTT CACGCCTACG CTTTCCGGCG AATATGAGAT CCGTGTGTAT
GCACCGGATG CACAATCGTA TGTAAGCAAC TATTTCTATG CGTATGGCTG GGGCACCACT
TCTTCCACCT CGTTTGAAGT AAACACGGAA GGTAAAGTAA CCATTGAAAC CGACAAAACA
GCATACAACA CCGGAGATGA AGCCAAACTG TTATTCAAGA CACCGTTTGA AGGCAAGCTG
ATTGTTACCG TTGAACGCAA CCAGGTGTAT GAATACAAGG TGCTGGAAAC AAACAACCGT
TCTGCCAGCA TGACCCTTGC GTTAAAAGAC GCGTACCTGC CCAACGTATA TATTTCCGCC
ACACTGATTA AACCAAACAG CGACCAGCGT GTGCCGCTTA CGGTGGCACA TGGTTTCCAG
AACCTTTCTG TAAACAAAGC GGAAAACAAA CTGCCGGTTG AGATTATTGC CCTTGAGAAG
AGCCGTTCCA GAACCAGACA GAAGATCTGC ATCAAAACAA AAGCAGAGTC TGACATACAG
GTTACCATCG CGGTAATTGA TGAAGGAATC CTTCAGTTAA AAAACACCCA GACGCCTGAC
CCGTATGGGT TCTTCTACCG CAAACGTGCG CTTGAAGTAA ACTCGTATGA TGTGTACGCG
CGTTTATTAT CTGAGCTCAG CACCAGCAGC AGCCGTATCG GCGGGGATGG GTACAACCTC
AGCAAACGTG CCAACCCGCT CTCCAACAAA CGCGTGAAGC TGGTTACCTT CTGGAGCGGC
ATCTTAAAAA CCAATTCCAG CGGAGAAGTA TGTTACGAGA TTGATATTCC GCAATTCTCC
GGCGACCTGC GCATCATGGC TGTTGTATAT AAAGACAACC GTTTCGGCAG TGCGCAGAAA
AGCATGAAAG TGGCGGACCC GATTGTTATA TCTACCTCCC TGCCGCGCTT CCTGAGCCCG
GGCGACTCTT TAACCATGCC GGTAACCATG AGCAATACAA CCGCCAAACC GATGAGCGCC
AGCGTAAACA TTGGCACCAC AGGTGCTGTA CGTGTTTCCG GTGCGGCAAA CCAGAATGTA
CAGATCGCGG CGAATTCGGA AAAACAGGTA TACTTTACCG TGGTTGCGGA TAAAAAAACC
GGCCTGGCTA AAATCACCAC AACGATTAAA GCGATCAGCG AAACCTTTAC CGAAGAGACC
GACATCACGG TGCGTCCGGC CAGCTCGCTG ATCAAAGTAA GCGGCTCCGG CTTTGTAGCC
GGCGGCAGCA CGGCAAACGT TACGCTTACA AACGATTTCA TTCCATCAAG TACAACAACG
CGTATCCTGG TGAACCGTTC ACCGATTACA GGCTTTACCG ACAACTTAAG TTACCTGATC
GGGTATCCGT ATGGCTGTAT TGAGCAGACC ACCTCACGCG CCTTCCCGCA GCTGTACCTG
CGCGATCTGA TGAAAGAACT GAAACAGGTA AACTATACCG GTGCTTCGCC GGAAGAAATG
GTACAGGCGG GTGTAAACCG CATCTATACC TTCCAGACGT ATAACGGAAG CTTCAGCTAC
TGGCCGGGCC ACTACGAAGG CGACTGGTGG GGAACGGCGT ATGCCACGCA CTTCCTGATT
GAAGCGAAGA AAGCGGGCTA CGACGTATCG AGCCAGGTGA TTGATAAAGC CACCAGCTAC
CTGAAAGAAA AAGTAAAAGA GAAAGGACAG TATACCTATT ACTATTATGA CGGTGCCGGC
AAAAAAGCAA ACCGGGTAAT CGCGGCGAAA GAGATCTTCT ACTCGCTGTA TGTACTGAGC
CTGAACAACC AGCAGGATGT TTCGGTGATG AACTTCTATA AGAGCAACCC GGATCTGCTG
GCCGTAGACA GCCGTTATTT ACTGGCTTCT ACCTACCTGC GCACCGGCGA CCAGGGATCG
TACCGTACGT TGAGCCCGAA ATCGTTTGAC AATGAAAAAT CGATCAACAG CTTTGGCGGC
AGCTATTACA GCTATGTGCG CGATATGGCC ATTGCGCTGG ATGCCTTGGT TGAAAACGAT
CCGAACAACC CGCAGATCGG CATCATGACC AAACACCTGA GCGATGAATT AAAGCACCGC
CGCTATCTGA ACACGCAGGA AAATGCCTTT GCGCTGATTG CGCTGGGCAA GATTGCCCGT
AAGAATGCGG CAGGTACGGC CACTGCCGAT ATCAGAAGCA CGGATGGCGT GCTGGGTACA
TTTACCGGCA GCACCTTCCT TACGACTAAA AACCAATCGA ACAAAACCGT TACCATCAAC
GCCAAAGGTA CCGGCACCAT TTACTATTCA TGGGAAGCGG AAGGGATCAG CGAAACCGGC
AAGGTGAAAG AAGAAGACAG CTACCTGAGT GTACGCAGAC AGTTCTACGA CCGCAACGGC
AACGCAATTA CGGGCAACCG TTTTAAACAG AATGACCTGG TGGTGGTACG CATCGCGGTG
AGCTCTACCG ATGGCTCACA CGTGCAGAAT GTGGTACTGA CCGATATGCT GCCGGCCGGT
TTTGAAATTG AGAACCCAAG GCTGAATGAC TATTCGGATG CAGGCTGGAT CAAAAACGCC
GCTACCCCCG AACACTTTGA TATCCGCGAC GACCGCATCA ATATGTTTGT TACCGCAACC
AACACAACGC AGTACTATTA CTATATGGTG CGCGCGGTAA GTGTGGGTAC ATTCAAACTG
GGGCCATGCA GCGCCGATGC CATGTACAAC GGTGAATACC ATTCCTACAA TGGTTTGGGA
ACCATAACCG TGACGGAAAA ATAA
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| Protein sequence | MLSSIKTLTA CCLFMLCLAA CSKKNVIEIK ETNTQDEVDL QQNIVIVFTE EIAGDSALDT
WTANPLVVFT PEVKGMFKWT APNELTFSPT TGFAASTDYK AVLSPALETE SGDKKMKLGD
ETSFAFHTPY LNLIQVGNFW AKKESNKSVN EVRMALTFNY KINPSQLKEL LSISIDGKPV
AVDIYTTAVS NTIDVGISEA AVSYDNKKAA IQIKAGLKCV ESPYSTDKEI SVETFITSKS
DFQITGVTAE YTDKDGYINV VTNQEITTDQ IQSLIVLEPD LPVTIEKQTS GFYIKGNFNS
GEGYELTIKK ELTGIFGGTL KSDFTETILF GTPKPAISFV SQKGVYLSSK GNKNIAVRII
NVPKVKVTVY KVYANNVLSF FRNNSIGNYE YYDDEEYYYS DYGTSYYGLE DIGDVVYTKE
IETKNLKKVN GTPLLNLNFN DINQFKGIYI VKVTSTEDQW LRDSKFVSIS DIGLIAKQGK
DDMLIMTNSI LTNEAISGVE INLISHNNQT VYTTKTDGSG VIHITDLKNK IRNFNVRMIT
ATNGSDFNFL HFNQSYVENT EYETGGSKEN ETGYDAFIYG DREIYRPGET VYINNVVRDV
QWQVLKNVPV KVKVLLPNGK DFQNIRGTLN EQGAFATSFK LPESTVTGTY SIELYTSTNV
LLNAVNISVE EFMPDRIKVT STVNKEALSL SEPLTVNIQA MNLFGPPASN RNYEAELSLS
RKYFSAAKYP NYDFGINASS YNEFQNEVRE GTTDAEGKGK QDFTFSAAYK NCGVLQGKIF
TTVFDESGRP VHQVNRFDVY TQETFFGIQY TDNYVNTNQA FSIPLIAVNR AGEAVAASAR
VEVIKYDWQT VMQRTYGDDY RYVSQRKVRV MENKTISISR PGQPFIFTPT LSGEYEIRVY
APDAQSYVSN YFYAYGWGTT SSTSFEVNTE GKVTIETDKT AYNTGDEAKL LFKTPFEGKL
IVTVERNQVY EYKVLETNNR SASMTLALKD AYLPNVYISA TLIKPNSDQR VPLTVAHGFQ
NLSVNKAENK LPVEIIALEK SRSRTRQKIC IKTKAESDIQ VTIAVIDEGI LQLKNTQTPD
PYGFFYRKRA LEVNSYDVYA RLLSELSTSS SRIGGDGYNL SKRANPLSNK RVKLVTFWSG
ILKTNSSGEV CYEIDIPQFS GDLRIMAVVY KDNRFGSAQK SMKVADPIVI STSLPRFLSP
GDSLTMPVTM SNTTAKPMSA SVNIGTTGAV RVSGAANQNV QIAANSEKQV YFTVVADKKT
GLAKITTTIK AISETFTEET DITVRPASSL IKVSGSGFVA GGSTANVTLT NDFIPSSTTT
RILVNRSPIT GFTDNLSYLI GYPYGCIEQT TSRAFPQLYL RDLMKELKQV NYTGASPEEM
VQAGVNRIYT FQTYNGSFSY WPGHYEGDWW GTAYATHFLI EAKKAGYDVS SQVIDKATSY
LKEKVKEKGQ YTYYYYDGAG KKANRVIAAK EIFYSLYVLS LNNQQDVSVM NFYKSNPDLL
AVDSRYLLAS TYLRTGDQGS YRTLSPKSFD NEKSINSFGG SYYSYVRDMA IALDALVEND
PNNPQIGIMT KHLSDELKHR RYLNTQENAF ALIALGKIAR KNAAGTATAD IRSTDGVLGT
FTGSTFLTTK NQSNKTVTIN AKGTGTIYYS WEAEGISETG KVKEEDSYLS VRRQFYDRNG
NAITGNRFKQ NDLVVVRIAV SSTDGSHVQN VVLTDMLPAG FEIENPRLND YSDAGWIKNA
ATPEHFDIRD DRINMFVTAT NTTQYYYYMV RAVSVGTFKL GPCSADAMYN GEYHSYNGLG
TITVTEK
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