Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1183 |
Symbol | |
ID | 4183394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1359043 |
End bp | 1359711 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638071180 |
Product | hypothetical protein |
Protein accession | YP_677798 |
Protein GI | 110637591 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000143757 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00765527 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACTACA TTAAGCATCT AAATAAAGTT TTTGAAAGTA TTTATTACGA CGAAAGATTA ACGCCAAGCC ATGTATCATT GTATATGGCA TTATTTCGGC AATGGAACAT ACACCGGTTT AAAAATCCCT TATTGTATCA ACGCTTGGAA ATAATGAAAG GAGCGTGCAT TGGTTCACTG ACAACATATA CAAAATGCCT CAAAGAACTG CATGAATGGA AATATATCAA TTATAAGCCG AGCCGGAATT CGAACAATTC ATCCATTAGC ATGTACAGTT TCTGTACATC AGTATGTACA GGTGCAAGTA CAGACACATG TACAGAAACT GTACATGAAA GTGTACATGT ATTATATATA AACAATAATA AACAGAATAA ACATAGGGGA AACGAAAATA CATCCCCAAC CCATAATGAG GTTAAAGAAT TTTTTAATGA AAAAGAATGG CCGGAACAGG AAGCAGATAC ATTTTTTTTT CATTACCAGG CAACGGGTTG GTGTACCGCT AATCAAACAA AAATTCAGGA TTGGAAAGCC GCTGCTCAAA AATGGATGTT AAAAAAAGTA AAATTTGACA CCAGTGAAAG TGTAAATAAA TCAACACATA AAAATATAAA TGAAAAATTA CACACCAATA CAGACAGAAA CTACTCAGAA CCACTCTAA
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Protein sequence | MNYIKHLNKV FESIYYDERL TPSHVSLYMA LFRQWNIHRF KNPLLYQRLE IMKGACIGSL TTYTKCLKEL HEWKYINYKP SRNSNNSSIS MYSFCTSVCT GASTDTCTET VHESVHVLYI NNNKQNKHRG NENTSPTHNE VKEFFNEKEW PEQEADTFFF HYQATGWCTA NQTKIQDWKA AAQKWMLKKV KFDTSESVNK STHKNINEKL HTNTDRNYSE PL
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