Gene CHU_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1183 
Symbol 
ID4183394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1359043 
End bp1359711 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content34% 
IMG OID638071180 
Producthypothetical protein 
Protein accessionYP_677798 
Protein GI110637591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000143757 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00765527 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACTACA TTAAGCATCT AAATAAAGTT TTTGAAAGTA TTTATTACGA CGAAAGATTA 
ACGCCAAGCC ATGTATCATT GTATATGGCA TTATTTCGGC AATGGAACAT ACACCGGTTT
AAAAATCCCT TATTGTATCA ACGCTTGGAA ATAATGAAAG GAGCGTGCAT TGGTTCACTG
ACAACATATA CAAAATGCCT CAAAGAACTG CATGAATGGA AATATATCAA TTATAAGCCG
AGCCGGAATT CGAACAATTC ATCCATTAGC ATGTACAGTT TCTGTACATC AGTATGTACA
GGTGCAAGTA CAGACACATG TACAGAAACT GTACATGAAA GTGTACATGT ATTATATATA
AACAATAATA AACAGAATAA ACATAGGGGA AACGAAAATA CATCCCCAAC CCATAATGAG
GTTAAAGAAT TTTTTAATGA AAAAGAATGG CCGGAACAGG AAGCAGATAC ATTTTTTTTT
CATTACCAGG CAACGGGTTG GTGTACCGCT AATCAAACAA AAATTCAGGA TTGGAAAGCC
GCTGCTCAAA AATGGATGTT AAAAAAAGTA AAATTTGACA CCAGTGAAAG TGTAAATAAA
TCAACACATA AAAATATAAA TGAAAAATTA CACACCAATA CAGACAGAAA CTACTCAGAA
CCACTCTAA
 
Protein sequence
MNYIKHLNKV FESIYYDERL TPSHVSLYMA LFRQWNIHRF KNPLLYQRLE IMKGACIGSL 
TTYTKCLKEL HEWKYINYKP SRNSNNSSIS MYSFCTSVCT GASTDTCTET VHESVHVLYI
NNNKQNKHRG NENTSPTHNE VKEFFNEKEW PEQEADTFFF HYQATGWCTA NQTKIQDWKA
AAQKWMLKKV KFDTSESVNK STHKNINEKL HTNTDRNYSE PL