Gene CHU_1177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1177 
Symbol 
ID4183388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1355012 
End bp1355509 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content33% 
IMG OID638071174 
Producthypothetical protein 
Protein accessionYP_677792 
Protein GI110637585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000647133 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00771536 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTTATT CAAGAACAAC TAAGAATTTA GAATTGTTTG CATCGCATAT GGGTAAGTCA 
AGTGCTCAGG ATGTAGAGAA TTATTTAGGA GTTAAGAAGG GCTTAGTAGT ATTTAGTGAT
AAGCATGTAT CATATGGTAA ATATTATAAA AGAAAGAGAG TAGTGAATAA AGTATTTAAG
GCAAAAGATC ACGTTTCTAA GACTGATAAG ACAGTTCATA ATCAAACGTT GAATTATTAC
TGTGGTAAGC TTCAAAGGTT TTTAGATTGC GAGTTGAAGG GTGTTTCTAC GAAATATCTA
CAGGGGTATT TGAATTGGTT TATGTCTATT GAAAATGGAA AGAGAGAAGC ATCATCTGTT
AAGAGTGCTG TGATGGAGAA TAGAGTGGCG TTGGATATAT TTAAGCAGAA GGAAAAAGAG
TTTCAGTATT TCTTAAAAAT TAACGGTAGA AATAACTACG GGAAGTGTAG GGATAGGTAT
TATGGAAAAG TAGCATAG
 
Protein sequence
MSYSRTTKNL ELFASHMGKS SAQDVENYLG VKKGLVVFSD KHVSYGKYYK RKRVVNKVFK 
AKDHVSKTDK TVHNQTLNYY CGKLQRFLDC ELKGVSTKYL QGYLNWFMSI ENGKREASSV
KSAVMENRVA LDIFKQKEKE FQYFLKINGR NNYGKCRDRY YGKVA