Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1143 |
Symbol | |
ID | 4185198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1315558 |
End bp | 1316238 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638071140 |
Product | hypothetical protein |
Protein accession | YP_677758 |
Protein GI | 110637551 |
COG category | [S] Function unknown |
COG ID | [COG2836] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00632883 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATTT TGGGAAGTCT GCATTGCATT GGTATGTGCG GGCCGATCGC CCTTGCCTTA CCCATTCAAA CTGCTGATAA ACGTATGCGT CTTCTGGCTG CATTATTTTA TAATAGCGGA CGAGCTGTAA CCTACAGTAT ACTCGGAGCA ATTGTTGGAA CATTAGGTGC CGCATTTAAA ATAGCTGATT TGCAGCAGAT CGTATCAATT GCTTCAGGCT GCATGCTTGT AGTGTTGATC CTGGCTCCGT TTATATTCAG AAAAACTGCT TCCGGTAAAA CATGGATCGC GATTCCGTAT GTACACGCGT TAAAACAGTC GATCTCCGGG CATTTAAAAC AGCATACATT TTCTTCTTTG TTTGTTATTG GTTTACTGAA TGGTTTATTG CCCTGCGGGT TAGTATCGCT GACACTGATA GGATCTATAG CGATGGAGGA TGTATTTCAA AGCAGCCTGT ATATGGCTTT GTTTGGTCTC GGTACATTAC CGGCTATGGT AGCATTGATT TTTACAAAGA ATTATATTCC TGCATCATTA AAACACTTAT TTCAAAAGGC TGTACCTGTT TTTGTATGTG CCTTAGGAAT CGTATTGATT TTACGCGGAA TGAATTTAGG AATTCCGTAT GTAAGTCCGG CTGCAGATAA ATCCGGCTGC GCTGAAGTAT CTTGTCATTG A
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Protein sequence | MGILGSLHCI GMCGPIALAL PIQTADKRMR LLAALFYNSG RAVTYSILGA IVGTLGAAFK IADLQQIVSI ASGCMLVVLI LAPFIFRKTA SGKTWIAIPY VHALKQSISG HLKQHTFSSL FVIGLLNGLL PCGLVSLTLI GSIAMEDVFQ SSLYMALFGL GTLPAMVALI FTKNYIPASL KHLFQKAVPV FVCALGIVLI LRGMNLGIPY VSPAADKSGC AEVSCH
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