Gene CHU_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1139 
Symbol 
ID4185194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1312631 
End bp1312822 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content33% 
IMG OID638071136 
Producthypothetical protein 
Protein accessionYP_677754 
Protein GI110637547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000486464 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.969246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAGT TTATCAAATC ACACATGTCA ACGATAGGCG GCATTGAGAT CTACCCCTTG 
ATATCGTTCA TTATTTTCTT TGTATTCTTT TTGATTGTAG CCATTCTGGT TTTTAAAGAA
AGCAAAGAAA ATATTTCAAT CATGTCCAAT CTTCCTCTGG AAGATGAAAC AGAGCATTCT
TCTAACATCT AA
 
Protein sequence
MLKFIKSHMS TIGGIEIYPL ISFIIFFVFF LIVAILVFKE SKENISIMSN LPLEDETEHS 
SNI