Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1138 |
Symbol | cyo |
ID | 4185193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1310489 |
End bp | 1312627 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638071135 |
Product | putative bifunctional cbb3-type cytochrome c oxidase subunit I/II |
Protein accession | YP_677753 |
Protein GI | 110637546 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00103071 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.843172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACA ACACGCTCGA AAAATTTTCC TATGACAATA TAATTGTCAG GAATTTTATT TTTGCAACAA TGATCTGGGG AGTGATCGGT ATGGTGGTAG GTTTGTTAGC TGCCCTGCAA CTGGTTTTTC CAGTATTGAA TTTTGCAGAT ATTACTACGT TTGGCCGTAT ACGGCCATTG CATACAAATG CGGTTATTTT TGCCTTTGTA GGTAATGGTA TTTTTTCCGG TGTATATTAT TCCTTACAGC GTTTATGTAA AGCACGTATG TTCAGCGATA CCTTAAGCAG GATAAACTTC TGGGGCTGGC AGCTGATCAT TGTTTCAGCA GTGGCAACCT TACCTTTTGG CATCACAACA AGTAAAGAAT ATGCCGAGCT GGAATGGCCG ATTGATATTG CAATTACGAT CATCTGGGTT GTTTTTGGCT GGAACATGTT TGGTACCATT CTTAAAAGAA GACAGCAGCA TTTATATGTA GCCATCTGGT TTTATATCGG TACGTTTGTA ACCGTTGCCG TACTCCACCT TGTTAACTCG TTTGAAATTC CGGTAACATT TCTGAAAAGT TATTCCTGGT ATGCAGGTGT ACAAGATGCA CTGGTGCAAT GGTGGTATGG CCACAATGCT GTTGCATTCT TTTTAACAAC GCCATACTTA GGGCTTATGT ATTACTTTGT TCCTAAAGCG GCCAACAGAC CCGTTTATTC CTATCGTCTT TCCATCATTC ACTTCTGGGC ATTGATATTT ATGTATATCT GGGCCGGGCC GCACCACTTG CTTTATACGG CCTTGCCAGA CTGGGCGCAG ACGTTGGGTG TTGTATTCTC TGTTATGTTG ATTGCTCCTT CCTGGGGAGG CATGCTCAAT GGGTTACTAA CTTTACGCAG TGTGTGGGAT AAAGTACGCG TGGAACCGGT ATTGAAATTT TTTGTTGTAG CCATTACAGC TTATGGCATG GCTACTTTTG AAGGACCTAT GCTTTCTTTA AAAAGTGTAA ATGCAATTGC ACACTATACA GATTGGATCG TGGCACACGT ACACGTAGGT GCACTTGGCT GGAATGGGTT CTTAACATTT GGTATGATTT ACTGGCTGAT CCCGCGTATG TATAAAACGG AATTATTCTC AACCAGACTT GCCAACTTCC ATTTCTGGAT CGGCACCCTT GGTATCCTCT TTTATGCATT GCCGATGTAT TGGGCCGGCT TTACACAAAG TGCCATGTGG AAAGAATTTA CACAGGATGG CGTATTAGCG TATCCGAATT TCCTTGAAAC AGTATTGCAG CTTCGTACCA TGTACATGCT TCGCGCATTG GGTGGTGTGT TTTACCTCAC AGGTGTTATT GTGATGTGTT ATAACATTGC TAAAACAGTA GCTGCAGCAA CGGTATTTGA GAAAAACGAA GAAGCGGAAG CTCCTGCATT ACCTGCTGTA TATCACGCAC ACAAAGGTGA TCACTGGCAC CGATGGATCG AACGCAAACC AATACAATTG ATGTTTTTCA GTTTGATTGT GATTCTGATT GGCGGGATGG TAGAAATGAT TCCGACATTT CTGGTTAAAT CAAATATTCC TACAATCAGG TCGGTTAAAC CTTATACACC GCTTGAACTC GAAGGCCGTG ATATTTACAT CCGCGAAGGA TGTAACAACT GCCACTCTCA AATGGTGCGT CCGTTCCGTT CTGAGACCGT TCGGTATGGC GAGTATTCCA AAGCAGGAGA GTTTGTGTAC GACCACCCGC ATTTGTGGGG TTCTAAACGT ACCGGTCCGG ATTTACATCG TGTTGGCGGC AAATATCCAA ACTCCTGGCA TTACAACCAC ATGCTCGATC CAACACTTAC TTCACCGAAT TCCATCATGC CGGCATATGC TTCGATGTTA GAAAATATAC TGGATATTTC CGATACCGAA AAAAAGATAG CAGCCATGCG TACACTTGGC GTGCCATATG CGGAAGGATA TGAAAAAAAT GTTCATGCAG AAATGCGTAT ACAGGCCGAC GCAATTGTGA AAAGCCTGGC TGCAGATAAT ATTAAAGTGA CCAGGGATAA AGAAATTATT GCAATGATTG CTTACCTGCA GCGCCTTGGT ACAGATATTA AAGTTAACGA TTCAACTTCA ATCAAATAA
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Protein sequence | MNNNTLEKFS YDNIIVRNFI FATMIWGVIG MVVGLLAALQ LVFPVLNFAD ITTFGRIRPL HTNAVIFAFV GNGIFSGVYY SLQRLCKARM FSDTLSRINF WGWQLIIVSA VATLPFGITT SKEYAELEWP IDIAITIIWV VFGWNMFGTI LKRRQQHLYV AIWFYIGTFV TVAVLHLVNS FEIPVTFLKS YSWYAGVQDA LVQWWYGHNA VAFFLTTPYL GLMYYFVPKA ANRPVYSYRL SIIHFWALIF MYIWAGPHHL LYTALPDWAQ TLGVVFSVML IAPSWGGMLN GLLTLRSVWD KVRVEPVLKF FVVAITAYGM ATFEGPMLSL KSVNAIAHYT DWIVAHVHVG ALGWNGFLTF GMIYWLIPRM YKTELFSTRL ANFHFWIGTL GILFYALPMY WAGFTQSAMW KEFTQDGVLA YPNFLETVLQ LRTMYMLRAL GGVFYLTGVI VMCYNIAKTV AAATVFEKNE EAEAPALPAV YHAHKGDHWH RWIERKPIQL MFFSLIVILI GGMVEMIPTF LVKSNIPTIR SVKPYTPLEL EGRDIYIREG CNNCHSQMVR PFRSETVRYG EYSKAGEFVY DHPHLWGSKR TGPDLHRVGG KYPNSWHYNH MLDPTLTSPN SIMPAYASML ENILDISDTE KKIAAMRTLG VPYAEGYEKN VHAEMRIQAD AIVKSLAADN IKVTRDKEII AMIAYLQRLG TDIKVNDSTS IK
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