Gene CHU_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1132 
Symbolcrp 
ID4185187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1304279 
End bp1305346 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content40% 
IMG OID638071129 
Producttranscriptional regulator 
Protein accessionYP_677747 
Protein GI110637540 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.99008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA TTTTAGTAAT AGAAGACAAT CTAGAGGTAA GGGAAAATAT CGCAGAAATA 
CTGGAGCTGG CAGATTACAA GGTATTAACA GCAATGAACG GGAAAGTGGG AGTGGGACTT
GCAAAGCAAT CCATCCCTGA TTTGATCATT TGTGATGTAA TGATGCCTGA ACTGGATGGG
TATGGTGTGC TCCATCTTCT ATCAAAATCT CAGGAAACAG CTGTAATACC GTTTATATTT
CTAACTGCTA AAACGGAAAA AAGTGATGTC CGTAAAGGTA TGAACTTAGG CGCCGACGAT
TATTTAACAA AGCCGTTTGA TGATGTTGAA CTGCTGGATG CGGTTGAAAT CCGGCTGCGT
AAAAAAGAAT TGATTCGTAG TGCCGCTGTG GGCGGCGATC TGGATTCCAT TCATAAAATT
GTTTCTGAAG CAAGAGGCAA TCAGGAATTG GAAAAACTTA TTTCAGATCA GCGCAAGATC
AGCCGGTTTA AAAAGAAACA GATTCTGTAT TCAGAAGGCA ATAAAGCCAA TTCCTTATAT
TTTATTGTAA GCGGAAAATT GAAAACCTAT AAGACTAATG ACGACGGGCG TGAGCTGATC
ACAGGTTTAT ATAAAGAAGG CGATTTTCTG GGTTATATGA ATCTGCTTGA AGGCAGTGAT
CACACCGAAT CGGCCATGAT GCTGGATGAT TCAGAAATTC ATATCATTCC CAAAGATGAA
TTTTTTGCAG TCTTGTTCAG CAGCAAAGAT GTATCTGAAA AGTTCATTAA AATGCTTTCA
GACAACCTGA TTGAAAAGGA AGAACGTTTG CTGAAACTGG CATATAACTC CGTGCGCAAG
CGTGTAGCGG AATCGTTGTT TATGATCTAT TCAAATTTTC ATAAAGATGA AGATCCCTCA
GATTTTACGA TGGCTATTTA CCGGGACGAC CTGGCGGCTA TTGCCGGTGC TTCCAAGGAG
ACAGTCATCC GTACTTTATC CGATTTTAAA GACGAAGGAT TGATCAGTAT TCAGGGAAGT
AAGATCTCCA TTATCAACCT GGATAAACTT CAGAAAATGA AAAATTAA
 
Protein sequence
MKSILVIEDN LEVRENIAEI LELADYKVLT AMNGKVGVGL AKQSIPDLII CDVMMPELDG 
YGVLHLLSKS QETAVIPFIF LTAKTEKSDV RKGMNLGADD YLTKPFDDVE LLDAVEIRLR
KKELIRSAAV GGDLDSIHKI VSEARGNQEL EKLISDQRKI SRFKKKQILY SEGNKANSLY
FIVSGKLKTY KTNDDGRELI TGLYKEGDFL GYMNLLEGSD HTESAMMLDD SEIHIIPKDE
FFAVLFSSKD VSEKFIKMLS DNLIEKEERL LKLAYNSVRK RVAESLFMIY SNFHKDEDPS
DFTMAIYRDD LAAIAGASKE TVIRTLSDFK DEGLISIQGS KISIINLDKL QKMKN