Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1118 |
Symbol | |
ID | 4186493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1292087 |
End bp | 1292623 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638071115 |
Product | hypothetical protein |
Protein accession | YP_677733 |
Protein GI | 110637526 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00717084 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAA TGCCTGTATC CAAGCGTTTT GTAATTATTG TATGCTTACT GATTATAACT ATTTATAAGG TTAAGGCACA AAATGTTTCT AATGGATATC AATTATTTCA CACATTTGAA ATGCCAGAGG AACAGCAATA TCAAGGTCCG TGGGAAATTC TGCTGGATTC AGCTACTAAT TATTTTTTTA TTTCATACAC AGGTAAACCG CAAACCTTGT ATGTATATGA TATGAAAACC TGGAAACTGC TTCATCAGTG TAAAATTGAG ATGGCTTTAC TGGATATCTC CTTTGTAGAT GTTAAAACAA ATGCGCTGTT TCTTTTTATA GATCAGAAAC ATTACTGCGT ATTAAAGCTG GATACGTTTG AATTAATTAC GTATAAAGTT AAAAACGGAG AGTTTCCGGC GGGATTCAAT TCTTTTAATT ATGATACACC TGTTTTTGAT TATGACGGCG ACAGTGCTAT TAATAAGAAA AAAAACTATC TGATTAAATT CAATCCGGAA AAAGTTGAAG TTTTTTTGAA AAAATAA
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Protein sequence | MEKMPVSKRF VIIVCLLIIT IYKVKAQNVS NGYQLFHTFE MPEEQQYQGP WEILLDSATN YFFISYTGKP QTLYVYDMKT WKLLHQCKIE MALLDISFVD VKTNALFLFI DQKHYCVLKL DTFELITYKV KNGEFPAGFN SFNYDTPVFD YDGDSAINKK KNYLIKFNPE KVEVFLKK
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