Gene CHU_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1118 
Symbol 
ID4186493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1292087 
End bp1292623 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content31% 
IMG OID638071115 
Producthypothetical protein 
Protein accessionYP_677733 
Protein GI110637526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00717084 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TGCCTGTATC CAAGCGTTTT GTAATTATTG TATGCTTACT GATTATAACT 
ATTTATAAGG TTAAGGCACA AAATGTTTCT AATGGATATC AATTATTTCA CACATTTGAA
ATGCCAGAGG AACAGCAATA TCAAGGTCCG TGGGAAATTC TGCTGGATTC AGCTACTAAT
TATTTTTTTA TTTCATACAC AGGTAAACCG CAAACCTTGT ATGTATATGA TATGAAAACC
TGGAAACTGC TTCATCAGTG TAAAATTGAG ATGGCTTTAC TGGATATCTC CTTTGTAGAT
GTTAAAACAA ATGCGCTGTT TCTTTTTATA GATCAGAAAC ATTACTGCGT ATTAAAGCTG
GATACGTTTG AATTAATTAC GTATAAAGTT AAAAACGGAG AGTTTCCGGC GGGATTCAAT
TCTTTTAATT ATGATACACC TGTTTTTGAT TATGACGGCG ACAGTGCTAT TAATAAGAAA
AAAAACTATC TGATTAAATT CAATCCGGAA AAAGTTGAAG TTTTTTTGAA AAAATAA
 
Protein sequence
MEKMPVSKRF VIIVCLLIIT IYKVKAQNVS NGYQLFHTFE MPEEQQYQGP WEILLDSATN 
YFFISYTGKP QTLYVYDMKT WKLLHQCKIE MALLDISFVD VKTNALFLFI DQKHYCVLKL
DTFELITYKV KNGEFPAGFN SFNYDTPVFD YDGDSAINKK KNYLIKFNPE KVEVFLKK