Gene CHU_1043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1043 
Symbol 
ID4184379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1204519 
End bp1204857 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content35% 
IMG OID638071041 
Producthypothetical protein 
Protein accessionYP_677660 
Protein GI110637453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000721444 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCT TTTCATACAT ATTGGTCTTC CTCTTTTGCC TGGGTGTTTT AGGCAAAACA 
AATCTATTAA CCTTCATAAA AAAAATAAAA TCCCCCATTG AATTGACGTC CGAGGCTGAT
GATGATAACA AAGAAGCTGA TCCGGAAAAA AATAAAGATA AAGAACGCGA TGTAAAAGAA
GAGCGCGAAG AAGACAAAAA CACATTTTTT TTTAGCAATT ATATACCCTT TTCAGTCATA
TCAAATGTCA GCTGCAACAA GCATCTGTTA AGCCTGATCA ACATCCGTTT CAAATCCTTT
TCAAAGGAAA TTGATACACC GCCTCCCCAA AAAGCGTAA
 
Protein sequence
MKFFSYILVF LFCLGVLGKT NLLTFIKKIK SPIELTSEAD DDNKEADPEK NKDKERDVKE 
EREEDKNTFF FSNYIPFSVI SNVSCNKHLL SLINIRFKSF SKEIDTPPPQ KA