| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1036 |
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| Symbol | lpxA |
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| ID | 4184372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1195617 |
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| End bp | 1196396 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638071034 |
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| Product | UDP-N-acetylglucosamine acyltransferase |
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| Protein accession | YP_677653 |
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| Protein GI | 110637446 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
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| TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0630219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCAGC CATTAGCATA TATACATCCG GAAGCTAAGA TTGCACAGAA TGTAGTAATC
GAACCATTTA CAACGATTCA TAAAAACGTT GAAATAGGTG AAGGTACCTG GATAGGCCCC
AATGTTACGA TTATGGAAGG TGCGCGTATC GGAAAAAACT GCAAGATTTT CCCGGGTGCA
TCTATTTCAA CGCTTCCTCA GGATCTGAAA TTTGAAGGAG AAGAAACATT AACAATCATT
GGTGACAATA CCGTTATCAG AGAATGTGTT ACCATAAGCA GAGGTACAAA AGATAAATTC
AAGACTGTTG TAGGCAGCAA TTGCTTATTA ATGGCATATG TACACATTGC ACACGATTGT
ATCGTAGGTG ATCACTGTAT CCTTGCAAAT GCGGTACAGG TTGCTGGCCA CGCTATTATT
GATGATTATG CAATCATCAG TGGTGCGAGC GCTATTCACC AGTTCTGCAA GATCGGTGCA
CACGTGATGG TATCCGGAGG TTCATTGGTA CGTAAAGATG TTCCGCCATA TACAAAGGCC
GGACGTGAGC CGTTGAGCTA TTGCGGGATT AACTCCGTAG GATTAAGACG TCGTGGTTTT
TCAAATGAAA AAATCAACGA GATACAGGAT ATTTACCGTG TTATTTATTT AAGAGGATTC
AATAACTCTC AGGCATTAAA TCACCTGGAA GTAAACTTCG CGCCTTCAAA AGAATTAGAT
GAGATCGTAA ACTTCATGCG CAACTCGGAC AGAGGTATCA TGAAAGGAAT AGGCGACTAG
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| Protein sequence | MNQPLAYIHP EAKIAQNVVI EPFTTIHKNV EIGEGTWIGP NVTIMEGARI GKNCKIFPGA
SISTLPQDLK FEGEETLTII GDNTVIRECV TISRGTKDKF KTVVGSNCLL MAYVHIAHDC
IVGDHCILAN AVQVAGHAII DDYAIISGAS AIHQFCKIGA HVMVSGGSLV RKDVPPYTKA
GREPLSYCGI NSVGLRRRGF SNEKINEIQD IYRVIYLRGF NNSQALNHLE VNFAPSKELD
EIVNFMRNSD RGIMKGIGD
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