Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1005 |
Symbol | ugpQ |
ID | 4186916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1153730 |
End bp | 1154545 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638071002 |
Product | glycerophosphodiester phosphodiesterase |
Protein accession | YP_677622 |
Protein GI | 110637415 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.382859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0862396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCAGG TACCCGCTTC TTTTGACATA CAGGGCCACA GGGGCTGCCG TGGCTTGTTA CCGGAAAATA CGATCGCTGC TTTCACCAAA GCCTTATTAC TGGGCGTAAC AACGCTGGAG TTTGATTTGG TTATATCAAA AGATAACCGA GTGGTTGTAT CGCATGATAC TTTTTTTCAT CATGAAATAA CCATGATGGT AGACGGCGAA GATGTTACTG AAGCGAATGA GAAAAATTTC AATTTATATG CGATGAATTA TGCAGATATA AAAGAAATTG ATGTCGGTAT GAAAACACAT CCGCGTTTTA AAAGTCAGAA AAAAGTACCG GCGGTTAAGC CGCTATTCAG AGAATTAATA GAAACAGCTG AAAAACTCAG CGCTAAAATT CAGTATAACG GTGAAATAAA ATCTACCGTT GAAGGCGACA ACATTGACCA TCCGAACATT GCCTTATTCT GTGATCTTGT TGTTGCTGAA ATAAAAAAAG CACATATCAC AGACCGCTTC ACTCTTCAGT CATTTGATGT ACGTGCCTTA GAGTATATGC ACAGTCAGTA TCCGGATATA AAATTATCCT ATCTGGTAGA AACGAAAGGA ACATTAAAAA AACAACTCGA AAAATTATCC TTCACTCCTG CTGTATATAG CCCGGACGTT ACTCTTGTAT CCAAAAAAGA TATAGACGCT GCGCACAAAC TGGGTATGCG CGTTATTCCC TGGACGGTAA ATACAAAAGA AGAAATTGAA ACCCTTATTA GCTTAGGTGT TGACGGAATT ATTACCGATT ATCCAGATTT ATTTTTTGAG AAATAA
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Protein sequence | MIQVPASFDI QGHRGCRGLL PENTIAAFTK ALLLGVTTLE FDLVISKDNR VVVSHDTFFH HEITMMVDGE DVTEANEKNF NLYAMNYADI KEIDVGMKTH PRFKSQKKVP AVKPLFRELI ETAEKLSAKI QYNGEIKSTV EGDNIDHPNI ALFCDLVVAE IKKAHITDRF TLQSFDVRAL EYMHSQYPDI KLSYLVETKG TLKKQLEKLS FTPAVYSPDV TLVSKKDIDA AHKLGMRVIP WTVNTKEEIE TLISLGVDGI ITDYPDLFFE K
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