Gene CHU_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0997 
Symbol 
ID4186908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1145053 
End bp1145910 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content46% 
IMG OID638070994 
Productdienelactone hydrolase-related protein 
Protein accessionYP_677614 
Protein GI110637407 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.107963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TAATTACACT GCTGTTTTCG ATTATGGCTA TACAACCACT TGTACAGGCC 
CAACAGCAAG CGAGTTGCTG TGCTGTTTCA AAAACAAGTC ATACGGGCAT GTCTGTATTC
AGTTCAGACG CTGCTTTCCG CAGATCGCAT AAATCACCAA AAGCATTTAC CTATACGGAT
GCCAAAGGAA GTATGATCCA GTTTGATGCT CCTGATGGAA AGAAGGCCAA TGCCTATATG
GTAAAAGCTT CATCGCCCAG TACCAAATAT GTGTTCCTGA TCCACGAATG GTGGGGCCTG
AACGATTACA TTAAAAAAGA TGCAGATAAA TTATATGCGG ACCTGGGCGG TAACGTAAAC
ATCATGGCGC TCGATCTATA CGATGGTAAA GTAACAGCCA ACCGCGACTC CGCCGCGGCC
TACATGGGTG CTGCAAGTGC TACACGCATC GGGTCTATTT TAAATGGTGC ATTTATGTTT
GCAGGTGATA AAGCAGAAAT TATATCCATG GGCTGGTGCT TTGGCGGCGG CTGGGCGCTG
CAGTCCTCTA TTCTTGCGGG CAATAAGAGC AAAGGCACCA TCATGTATTA CGGCATGACG
GAAAAAGATC CGGTGAAACT GGCCGGACTG AAAGGTGATG TGCTTGGGAT CTTTGGTTCA
AAAGATAAGT GGATCAACCC GGAGATGGTT GCTGCATTTG ATAAAGACCT GACTGCTGCC
GGGAAAAAAC ATACAATAAA AAGTTTTGAC GCGGATCACG CATTCGCCAA TCCAAGCAAT
CCGCAATTTA ACAAAGCGTA TACCGAAGAA GCGTGGGGCA TGAGTGTGGC GTTTATTAAA
AAGGCGTTTG GTTTGTAA
 
Protein sequence
MKKIITLLFS IMAIQPLVQA QQQASCCAVS KTSHTGMSVF SSDAAFRRSH KSPKAFTYTD 
AKGSMIQFDA PDGKKANAYM VKASSPSTKY VFLIHEWWGL NDYIKKDADK LYADLGGNVN
IMALDLYDGK VTANRDSAAA YMGAASATRI GSILNGAFMF AGDKAEIISM GWCFGGGWAL
QSSILAGNKS KGTIMYYGMT EKDPVKLAGL KGDVLGIFGS KDKWINPEMV AAFDKDLTAA
GKKHTIKSFD ADHAFANPSN PQFNKAYTEE AWGMSVAFIK KAFGL