| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0976 |
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| Symbol | sufD |
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| ID | 4183518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1121371 |
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| End bp | 1122648 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638070973 |
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| Product | iron-regulated ABC transporter, membrane-spanning permease |
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| Protein accession | YP_677593 |
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| Protein GI | 110637386 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.307053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.223995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTACAG AATTAAAAGA ATCGCTGATA CAGCATTTTA ATACGCTTGA AAAAACGCCG
TCATCATCTC TATTAGTTGA TACGCGTAAA GAAGCAATCA GTGCTTTCCA GGAATTGGGC
TTCCCGACTA CAAAGCACGA GGAATGGAAA TACACGAATT TAAAAAACAC CATTGCCAAA
ACGTATGCAA TTGAATCTGC AGCAACATTT TCTGCAGACG ACATCAAAGC GCTAACAGCA
TTACCGATTG ACTGCTACAA AGTAATTTTC GTAAATGGCA TCTTCTCTCC TGCTCTATCT
TCGATAGATG CTTCAGGTGT AACAATTGAG CCTTTCCAAA CAAGCAATCA GGAAGTAGTA
AAAAACTATT TCGGAAAAAA CCTTCCATAC AATGACAGTA TGGTTGCATT GAATGTTGCC
TTTGCTACTG ACGGAACATT GATTCACGTA AAAGCAAAAC AACACATTAC AAAACCAATT
GTCTGCTTTT ATTTATCAGA CGTTCGTTCA GCAAATGTAT TTGCGCAGCC AAGTGTTTTA
ATTGTTGTAG AAGAAGCGGC ATCCGCAACG GTTGTTGAAC TGAACCGCAG CTTAGGTAAA
AATACTGCTT TCACGAATGC GTTTACGCAT GCAATCCTGA AAAAAGAAGC ATACCTGGAA
CAATACAAAA TTCAAAACGA TATTGATAAC AGCAACTTCA TTCACAATTC ACAAATTGTA
CATGAAGGAA AAAGTAATTC GTATACAACC ACCATTACAT TAAATGGAGG TTTGGTTCGA
AATAACTTAA ATATCACATT GGGTGCTGAA TACTGCGAAG CGTATTTAAA TGGCTTATAC
CTTGAAAAAG GTGCACAGCA TGTAGACAAC CACACGCTTG TAGACCATGC GATGCCGCAT
TGCTACAGCA ATGAGCTGTA CAAAGGCATT CTGGACGGAA AATCTACGGG TGTATTCAAT
GGTAAGATCT GGGTGCGTAA AGACGCTCAG AAAACAAATG CATTCCAATC GAATAAAAAC
ATATTACTTT CTAAAGAAGC TTCTGTACAT ACAAAGCCGC AATTAGAAAT CTTTGCAGAC
GATGTTAAAT GTTCGCACGG TGCAACAACC GGCCAATTAG ATCCGGAAGC CATGTTCTAC
CTACGTGCAC GTGGCGTAGG TGAAGATAAA GCAAAAAAAA TGCTTGTACA TGCCATTGCA
TTTGATGTAT TAGATAAAGT AAAACACGAC GAACTTCGTG GGTACTTAGA GCAAGAAATT
GAAGAAAGAT TAAAATAG
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| Protein sequence | MTTELKESLI QHFNTLEKTP SSSLLVDTRK EAISAFQELG FPTTKHEEWK YTNLKNTIAK
TYAIESAATF SADDIKALTA LPIDCYKVIF VNGIFSPALS SIDASGVTIE PFQTSNQEVV
KNYFGKNLPY NDSMVALNVA FATDGTLIHV KAKQHITKPI VCFYLSDVRS ANVFAQPSVL
IVVEEAASAT VVELNRSLGK NTAFTNAFTH AILKKEAYLE QYKIQNDIDN SNFIHNSQIV
HEGKSNSYTT TITLNGGLVR NNLNITLGAE YCEAYLNGLY LEKGAQHVDN HTLVDHAMPH
CYSNELYKGI LDGKSTGVFN GKIWVRKDAQ KTNAFQSNKN ILLSKEASVH TKPQLEIFAD
DVKCSHGATT GQLDPEAMFY LRARGVGEDK AKKMLVHAIA FDVLDKVKHD ELRGYLEQEI
EERLK
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