Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0975 |
Symbol | |
ID | 4183517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1119952 |
End bp | 1121211 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638070972 |
Product | aminotransferase class 5 protein; selenocysteine lyase |
Protein accession | YP_677592 |
Protein GI | 110637385 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.18075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.925491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGACA CCATCAATAC CGACCTTATA ACCGCCGATG GAACATTAAA CATCGACCGT ATCCGGGAAG ACTTCCCGAT CTTACATCAA GAGGTGAATG GTAAGCCTTT GGTGTATTTT GACAATGCTG CTACTACACA AAAACCCATA CAAGTTGTCG AAGCACTTAC GGCGTATTAT TTAAACGACA ACGCGAATAT TCACCGTGGT ATTCATACCC TTGCCGAACG TGCTACTGCT GCTTTTGAAG CGTCTCGTGA TGCAGTAAAA ACATCCATCA ATGCCAAGGA ACGTGAAGAA GTAATTTTCA CGCGCGGCAC AACCGAAGGA ATCAACCTGG TTGCTTCAAC CTGGGGATTG GCTAATCTTA AAGCCGGTGA CGAGATTGTT GTTTCAGCAA TGGAACACCA TTCAAACATG GTACCCTGGC ACATGCTTGC ACAACGCACC AAAGCGGTTG TTAAAATATT ACCGATGAAT GATGCAGGTG AATTGCTTGT CGAAGCATTC GATACAATCA TTACATCCAA AACCAAAATG CTTGCCTGTA CACATGTTTC CAATACGCTT GGAAGCATCA ATCCTATAAA AGAACTGATT GCTAAAGCAC ATGCTGTTGG CGCGATTACC TTGATTGACG GTGCTCAGGC GGTTTCTCAC TTAGATATTG ACGTACAGGA TCTGGATGCA GATTTCTATG CATTCTCTGC GCATAAATTA TACGGACCTA CCGGTGTAGG TATCTTATAT GGTAAACGTG CGATCCTTGA AGCTATGCCT CCATATCAGG GCGGCGGCGA AATGATCAGC GAAGTAACGT ATGAGAGCTG CACCTACAAT GAGCTTCCCT ATAAGTTTGA AGCAGGTACG CCAAACATCG CGGATGTGAT AGCTTTGAAA GCTGCTATTG ATTACATAAA TTCTATTGGC AAGGCTGCTA TTCGTTCATA CGAACATGAA CTGCTTGATT ATGCAGTCTC AAAATTGAAG GATATCGAAG GTATCCGTTT GATCGGAACA GCAAAAGATA AAGTGAGTGT GCAGTCGTTT GTATTTTCAG ACATACACCA CCAGGATTTA GGAATTATAT TAGATCAAGA AGGTGTTGCG ATCCGTACCG GTCACCATTG TACACAACCG TTAATGGGAA GATTGGGCGT TACGGGAACT TCTCGCGCCT CTTTTGCATT TTATAATACA AAGGAAGAAA TCGACCAATT CATTGCTGCC ATTTACAAGG CAATAAAATT ATTCAGATAA
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Protein sequence | MIDTINTDLI TADGTLNIDR IREDFPILHQ EVNGKPLVYF DNAATTQKPI QVVEALTAYY LNDNANIHRG IHTLAERATA AFEASRDAVK TSINAKEREE VIFTRGTTEG INLVASTWGL ANLKAGDEIV VSAMEHHSNM VPWHMLAQRT KAVVKILPMN DAGELLVEAF DTIITSKTKM LACTHVSNTL GSINPIKELI AKAHAVGAIT LIDGAQAVSH LDIDVQDLDA DFYAFSAHKL YGPTGVGILY GKRAILEAMP PYQGGGEMIS EVTYESCTYN ELPYKFEAGT PNIADVIALK AAIDYINSIG KAAIRSYEHE LLDYAVSKLK DIEGIRLIGT AKDKVSVQSF VFSDIHHQDL GIILDQEGVA IRTGHHCTQP LMGRLGVTGT SRASFAFYNT KEEIDQFIAA IYKAIKLFR
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