Gene CHU_0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0967 
Symbol 
ID4184943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1115928 
End bp1116422 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content34% 
IMG OID638070964 
Producthypothetical protein 
Protein accessionYP_677584 
Protein GI110637377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00616994 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.747539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA TAAAAGCCCC ATTCGATGTT AAAACAATCC TGAATCTTTT AAAAAGCCAT 
TCTCACCCTC AGGATGATTC ATGGAATACA GAAGAGTTCG ACATAAAACA TGCTACAGAG
AAAACCTATA TCTGCGAGAT AAAAGGAAAT ACATTTAAAT TACGTGCCAG AAAAACAAAT
CAACGGAGGC AATCCAGGCC TATTGGATAC GGGAAATTTG TAAAAGTCAA TAAAGACATC
ACGATACAAA TTACCGTCAT TCCTCATATC GGCAGTATTA TAATCTGGTT ATTTTTCATC
CTCTTACCGC TGGCATTTCT TATATCAGCA ATCGCTTCCG GAGATATACT TGCAACGATC
GCTGCATTAT TGATCGTATC ACTACTCTGT GCTTTTTTCA TTCTAACATT AAAATATGAC
ACACACGATA TGGAATTGTT TGTAAAAAAA GCATTATCTA AAAATGCAAA TAACCAATTA
CCAGTAAAAA ATTAA
 
Protein sequence
MIKIKAPFDV KTILNLLKSH SHPQDDSWNT EEFDIKHATE KTYICEIKGN TFKLRARKTN 
QRRQSRPIGY GKFVKVNKDI TIQITVIPHI GSIIIWLFFI LLPLAFLISA IASGDILATI
AALLIVSLLC AFFILTLKYD THDMELFVKK ALSKNANNQL PVKN