| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0960 |
|---|
| Symbol | fucP |
|---|
| ID | 4184936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1106430 |
|---|
| End bp | 1107695 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638070957 |
|---|
| Product | fucose permease |
|---|
| Protein accession | YP_677577 |
|---|
| Protein GI | 110637370 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.608891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAT TAACACTTCA GATTAGTAAA AATCAAAGAC TAGTACTGAT TTTTGTAATG
GCTGTCCTCT TTTTTATGTG GGGCTTATTA ACCAATTTGA ATCTTTTTTT ATACCACCAT
TTCAAGGTTG TATTTGGATT AAATTATTCT GTATCAACAC TAATTAATTT AACATTCTTT
TGTACCTACC TTATTGTTTC GCTGCAGGCC GGTAGCATGA TCCGGCGTGT GGGCTACAAG
CGTGGTATTC TGATCGGTTG GTTGCTGGCC TGTACAGGTT GTTTTTTGTT TTTATTGTCG
GTTACATCAA AATTATATTA TCTTTTTTTG GTTGCCTTAT TCTGTATGGC AGCAGGTATA
ACCATTCTGC AGGTTGGTGC AAATCTATAT GTAGTATTAT TAGGTGGTGT TGAACGTGCA
GCGAGCAGAC TCGTGTTTGT TCAGGCATTT AACTCTTTTG GTACCGTAAT CGGCCCCATT
GTATCGATGG AGATTTTAAG TAAGTTCATA AACATTCCGT TTGAATATTT AGAAATGCTT
CCATTGATCG ATAAAGTAAC GATCGAGTCG GCATACATTA ATTATTTATA TCTTATTTTT
GGTGTTGCAA TGGTTCTTTT TGCCATTTTC CTGATGCTGA TATATCTTCC TGAAATGGAT
ACGCATTTAT TAGAGCCGTT AAATAAAGTA ACATCAAAAA GAAAACGTCA CGTAATGCAC
TTTTCTCAGT TGCGTTTAGG TGCATTTGCT ATTTTTGCCT ATGTAGGAGC AGAAGTAGCA
TTAGCAAATT ACCTGGAAGA TTTTTCCCCG GATTTAGCCA GCAGATATTG GCAGCTGGCC
ATGCTTGGCC GTTTTGTAGG AGCCTTTTGC TTACTGTTTA TTCCTGCCAA TAAAGCATTA
GGTACAGTAG CAGGTATTTC TTCTTTATTG ATTCTGGTGG CAATTTTATT ACCGAAAGAA
TATGTAGAAT ATAATTTTTA TTTAATCATG ACCGTTGGCC TTTTCAACTC CATTATTTTT
CCGAGCATTT TCACACTTGG CGTAAATGGA TTGGGTAAAT TTTCATTAGA CGGTTCAGCA
GTATTGATTA TGTTTATTGT AGGGGGGGCT GTTATACCTT TTAATGTACG GAACTTCGCC
TTTGTTAATT ATGACTTCGC TCTTATCATA GTTGTAGCCT GTTATTTATA CATATCATTA
TATGGTTTCA GATTATCCAG GTATTTAAAA CGGAATGATC TGAAAGACGA TGAAATGCTG
GCGTAG
|
|---|
| Protein sequence | MKELTLQISK NQRLVLIFVM AVLFFMWGLL TNLNLFLYHH FKVVFGLNYS VSTLINLTFF
CTYLIVSLQA GSMIRRVGYK RGILIGWLLA CTGCFLFLLS VTSKLYYLFL VALFCMAAGI
TILQVGANLY VVLLGGVERA ASRLVFVQAF NSFGTVIGPI VSMEILSKFI NIPFEYLEML
PLIDKVTIES AYINYLYLIF GVAMVLFAIF LMLIYLPEMD THLLEPLNKV TSKRKRHVMH
FSQLRLGAFA IFAYVGAEVA LANYLEDFSP DLASRYWQLA MLGRFVGAFC LLFIPANKAL
GTVAGISSLL ILVAILLPKE YVEYNFYLIM TVGLFNSIIF PSIFTLGVNG LGKFSLDGSA
VLIMFIVGGA VIPFNVRNFA FVNYDFALII VVACYLYISL YGFRLSRYLK RNDLKDDEML
A
|
|---|
| |