Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0946 |
Symbol | |
ID | 4183644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1095222 |
End bp | 1096250 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070943 |
Product | hypothetical protein |
Protein accession | YP_677563 |
Protein GI | 110637356 |
COG category | [R] General function prediction only |
COG ID | [COG2374] Predicted extracellular nuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGTA TGAATATCAG TGCAATACTT TTATTTTTTG TTTCTCTATT ATCTTTCTCC TGTTCATACC GTACCGAAAC AGTTAATAAA TCTGCGAAGA CGGCTGCTAC AACCTGCAGA ATCGGATTTT ACAATACGGA GAATCTTTTT GACATATATG ACGACAAACA CAGCAATGAC AATGATTTTT TACCTTTGGG CAAACTAAAA TGGACAGCAG ACCGGTATGA TGTAAAGCTG AAACACATAA AAGAAGTTAT TGATGGTTTG AATGACCTGT CAACACTGGC TTTGATCGGT ATGTCTGAAG TGGAAAACAA AGAGGTTCTG GAAGACTTGT TGAAAAACGA TACAACCTTT CAGATCATAC ATTACAACTC GTCTGACCGC AGAGGAATAG ATGTTTGCCT GTTGTATAAC CCTGCTTATT TTACTCCGCT TACATCATAT TTGTCCAGCT TCGACAAAAG TAATGATCCT GAGCTGTTCT TACGTGAAGT GCTGGTGGTT AAAGGTGTTT TATGGAATGA TACGGTACAC GTACTGGTTA ATCACTGGCC ATCGCGCAGA GAAGGTGAAG AAAAATCTGA AACAAAACGT ATCGCAGCTG CTATGCTTAC GCAGGAGATT ATAGATTCAA TCATTCAGGT TAATCCATCA AATAATATCC TGCTGATGGG CGATTTCAAT GATCAGCCAT CCGATAAAAG TATGTCGGTT ATGCTGAATC TGAAAACAAC AAAAAAAGGT AAGGACGGTG AATTGATTAA CCCCTTTAAA GCCTTGCAGG AAGCAGGCGA GGGGACATGT AAATACAAAC ACGACTGGTT TTTATTTGAT CAGATTTTAA TCAGTAATTC CATTTCAAAT AAAAAAGGAT TTCAATTTAC GGATGCAGAG ATTTATCATC CGGAATGGCT GTATTATAAA AATGATTTGA AATCAGGCCC CTTCAGAAGT TATTTAGGTA ATACATATTA CGGCGGTTAC AGCGACCACT TTCCGGTATA CATTGAATTG AAAAAATAA
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Protein sequence | MKCMNISAIL LFFVSLLSFS CSYRTETVNK SAKTAATTCR IGFYNTENLF DIYDDKHSND NDFLPLGKLK WTADRYDVKL KHIKEVIDGL NDLSTLALIG MSEVENKEVL EDLLKNDTTF QIIHYNSSDR RGIDVCLLYN PAYFTPLTSY LSSFDKSNDP ELFLREVLVV KGVLWNDTVH VLVNHWPSRR EGEEKSETKR IAAAMLTQEI IDSIIQVNPS NNILLMGDFN DQPSDKSMSV MLNLKTTKKG KDGELINPFK ALQEAGEGTC KYKHDWFLFD QILISNSISN KKGFQFTDAE IYHPEWLYYK NDLKSGPFRS YLGNTYYGGY SDHFPVYIEL KK
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