Gene CHU_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0946 
Symbol 
ID4183644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1095222 
End bp1096250 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content38% 
IMG OID638070943 
Producthypothetical protein 
Protein accessionYP_677563 
Protein GI110637356 
COG category[R] General function prediction only 
COG ID[COG2374] Predicted extracellular nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGTA TGAATATCAG TGCAATACTT TTATTTTTTG TTTCTCTATT ATCTTTCTCC 
TGTTCATACC GTACCGAAAC AGTTAATAAA TCTGCGAAGA CGGCTGCTAC AACCTGCAGA
ATCGGATTTT ACAATACGGA GAATCTTTTT GACATATATG ACGACAAACA CAGCAATGAC
AATGATTTTT TACCTTTGGG CAAACTAAAA TGGACAGCAG ACCGGTATGA TGTAAAGCTG
AAACACATAA AAGAAGTTAT TGATGGTTTG AATGACCTGT CAACACTGGC TTTGATCGGT
ATGTCTGAAG TGGAAAACAA AGAGGTTCTG GAAGACTTGT TGAAAAACGA TACAACCTTT
CAGATCATAC ATTACAACTC GTCTGACCGC AGAGGAATAG ATGTTTGCCT GTTGTATAAC
CCTGCTTATT TTACTCCGCT TACATCATAT TTGTCCAGCT TCGACAAAAG TAATGATCCT
GAGCTGTTCT TACGTGAAGT GCTGGTGGTT AAAGGTGTTT TATGGAATGA TACGGTACAC
GTACTGGTTA ATCACTGGCC ATCGCGCAGA GAAGGTGAAG AAAAATCTGA AACAAAACGT
ATCGCAGCTG CTATGCTTAC GCAGGAGATT ATAGATTCAA TCATTCAGGT TAATCCATCA
AATAATATCC TGCTGATGGG CGATTTCAAT GATCAGCCAT CCGATAAAAG TATGTCGGTT
ATGCTGAATC TGAAAACAAC AAAAAAAGGT AAGGACGGTG AATTGATTAA CCCCTTTAAA
GCCTTGCAGG AAGCAGGCGA GGGGACATGT AAATACAAAC ACGACTGGTT TTTATTTGAT
CAGATTTTAA TCAGTAATTC CATTTCAAAT AAAAAAGGAT TTCAATTTAC GGATGCAGAG
ATTTATCATC CGGAATGGCT GTATTATAAA AATGATTTGA AATCAGGCCC CTTCAGAAGT
TATTTAGGTA ATACATATTA CGGCGGTTAC AGCGACCACT TTCCGGTATA CATTGAATTG
AAAAAATAA
 
Protein sequence
MKCMNISAIL LFFVSLLSFS CSYRTETVNK SAKTAATTCR IGFYNTENLF DIYDDKHSND 
NDFLPLGKLK WTADRYDVKL KHIKEVIDGL NDLSTLALIG MSEVENKEVL EDLLKNDTTF
QIIHYNSSDR RGIDVCLLYN PAYFTPLTSY LSSFDKSNDP ELFLREVLVV KGVLWNDTVH
VLVNHWPSRR EGEEKSETKR IAAAMLTQEI IDSIIQVNPS NNILLMGDFN DQPSDKSMSV
MLNLKTTKKG KDGELINPFK ALQEAGEGTC KYKHDWFLFD QILISNSISN KKGFQFTDAE
IYHPEWLYYK NDLKSGPFRS YLGNTYYGGY SDHFPVYIEL KK