Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0937 |
Symbol | proC |
ID | 4183636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1075225 |
End bp | 1076031 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070936 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_677556 |
Protein GI | 110637349 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG CAATTTTAGG TGGAGGCAAT ATGGGTATGA CTTATGCAAA AGCATTTGTC AGCAGAAAAA TTGTTTCGAA AGATGAATTA TTGATTATTG AAAAACATGA TGAAAAAAGA GAACAATTAA AACAGGAAGG AGTAGCTTCT TTGTCTGCTG ATATCGATGA TTCGATTAAG AATTACGATA TTTTAATTGT TGCAGTAAAA CCACAGGATT TTAGAGTTTT ATCTGAAACG CTGAAAAAAT ATCTGACAGA AAATCAAATG ATACTTTCCA TTATGGCGGG TATTCAGATT GCTCAGATTC AAACCTTACT TGAACATAAA AACGTAGTAC GTGCCATGCC GAATACACCT GCGCAGTTGG GCTTTGGTAT TACAGCATTT ACAGTTGCTA AAGATGCTTC GTTTGAAAAT ATAAGTGTTG TAGATATGCT TTTGGAAACT ACCGGGAAAG CAATTTTTAT GAAAGACGAA ACCATGCTGG ATGCAGTAAC AGCATTAAGC GGAAGCGGCC CTGCGTATTT TTATTATATC GTTCAGAACA TGATCGAAGC CGGTAAACAA ATGGGCGTGG ACGAAAATGT GGCTGGCATG CTCGTGAAAG AAACCATGAT GGGCGCTTTT CAGATTTTGA ACCATTCAAA ATCATCCATT GATGAATTGA TTGCCATGGT TGCTTCAAAA GGTGGTACGA CAGAGGCTGC TTTAAATACG TTAAAACAGA GAGAAGTTGG TGCGCATATC ATCGAAGCAC TGAAAAATGC CGAAAAAAGG GCAAAAGAAC TCTCCGGGAA CGCCTAA
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Protein sequence | MKIAILGGGN MGMTYAKAFV SRKIVSKDEL LIIEKHDEKR EQLKQEGVAS LSADIDDSIK NYDILIVAVK PQDFRVLSET LKKYLTENQM ILSIMAGIQI AQIQTLLEHK NVVRAMPNTP AQLGFGITAF TVAKDASFEN ISVVDMLLET TGKAIFMKDE TMLDAVTALS GSGPAYFYYI VQNMIEAGKQ MGVDENVAGM LVKETMMGAF QILNHSKSSI DELIAMVASK GGTTEAALNT LKQREVGAHI IEALKNAEKR AKELSGNA
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