Gene CHU_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0930 
Symbol 
ID4184118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1066431 
End bp1067621 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content36% 
IMG OID638070929 
Producta-glycosyltransferase 
Protein accessionYP_677549 
Protein GI110637342 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0131712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTT TAGTTGCTTT ATCCCGGTTT CCCTATCCTA CAGATAAGGG AGATAAGTTA 
AGGGCTTTTT ATCAAATTAA AGAGCTTTCA AAAAAACATA CGGTCTTTTT ATTATGCCTT
TCAGATGAAG TTGTTGCTGA TAAACATCAG ATGAAAGTAA AAGAATATTG CGAAGAGATT
AAGATCATTC GTTTAGAAAA AAAACATATT TATTGGAATT TATTTTCATC TCTTTTTAAT
AAGTCTCCTT TTCAGGTGAA TTATTTTAAA AACAGTGAAA TGAAAATGAT CATGAGTCAA
TGGATTTATA AATTCAATAT TGACGTTGCA TATGTTCAGC TTGTGCGTCT GGTTGAAAAT
ATTCCGTTCG AAGAAGATAT TCCATTCTTT TTAGATTATA TGGATGCATT GTCTGAAGGG
ATGTACAAAC GGGTTCATTT CTCTACTTTT TATCAAAAGC CTTTGGTTCG TATAGAAGCA
AAACGATTGA AACAATATGA AATAAATGCA AGTAAATTAT TTCAGGGGTA TTCAATCATC
ACCAATCAGG ATGCGGAGTT TCTGCCTAAA TCGGTACAGA AAAACATGGC AATTATCCCT
AATGGCGTAA ACGATTATTA CCTGCAAGAT GCTGCGCGTA TTGAGAAAAA ATACGATTTG
ATTTTTACCG GTAACATGGG ATACCACCCC AATATTGTAG CTGCGCAGTT TATTGTGCAG
CAGGTATTAC CTTTACTGGC ATTGAAAGGA TTAAAGCTTT CCGTTTGCCT GGCAGGTACA
AGCCCTTCTG CGGATGTACT TAAATTACAA AGCGAAAATG TACTGGTTAC AGGTTTTGTG
GATGACATTA AACCTTACCT GTTAGGTTCC AGAATATTTG TGGCTCCGTT ATTAAGCGGT
TCCGGATTAC AGAATAAATT ATTGGAAGCA ATGGCCTGTG GATTGCCGTC CATTACAACA
AGTTTAGCCA ATAAGGCACT TGGGGCAAAG CATGAATCAC AGATTTATAT AGCTGACACG
GCTCAGGCAT TTGCAGATCG GATAGAATAT GTATTGGAAA ATGAACTTGT TGCTGAGAAA
ATTGGTAATG AAGGGAAAGA ATTTATAAAG GAGCATTTTG ACTGGTCTCA GACAACGGCT
TTGCTGGAGC AGGCATTTGA AGAAGTGGTT GAAAAAAGCC TGCAGCAATA A
 
Protein sequence
MNILVALSRF PYPTDKGDKL RAFYQIKELS KKHTVFLLCL SDEVVADKHQ MKVKEYCEEI 
KIIRLEKKHI YWNLFSSLFN KSPFQVNYFK NSEMKMIMSQ WIYKFNIDVA YVQLVRLVEN
IPFEEDIPFF LDYMDALSEG MYKRVHFSTF YQKPLVRIEA KRLKQYEINA SKLFQGYSII
TNQDAEFLPK SVQKNMAIIP NGVNDYYLQD AARIEKKYDL IFTGNMGYHP NIVAAQFIVQ
QVLPLLALKG LKLSVCLAGT SPSADVLKLQ SENVLVTGFV DDIKPYLLGS RIFVAPLLSG
SGLQNKLLEA MACGLPSITT SLANKALGAK HESQIYIADT AQAFADRIEY VLENELVAEK
IGNEGKEFIK EHFDWSQTTA LLEQAFEEVV EKSLQQ