Gene CHU_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0928 
SymbolrfaG 
ID4184116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1064109 
End bp1065233 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content40% 
IMG OID638070927 
Producta-glycosyltransferase 
Protein accessionYP_677547 
Protein GI110637340 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0110486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATATTG CTGTAAATAC ACGTTTGTTA TTGGAGGATC GCCTGGAAGG AATCGGCTGG 
TTTACGTATG AAACATTGAA ACGTATAACG GAACAGAATC CACAGCATAC GTTCCACTTT
TTCTTTGACA GACCCTATAA CGATAAATTT GTTTTCGGGA AAAATGTTGT TCCGCACGTA
TTGTTTCCGC AGGCAAGACA TCCCTTTCTT TGGTATATTT TCTTTGAATG GAGTATTCCG
TTTATGCTTC GGAAAGTAAA AGCGGATGCG TTTATTTCAA CAGATGGGTA TATGCCGAAG
TCTTCGAAAG TAAAAGTATT AAACGTAATT CACGATATAA ATTTTGAACA CCGGCCTCAG
GATTTACCCA AACGCGTAGC AAACTATTAC AAAAAGAACA TGCCCCTGTT CGCTCAGAAG
GCAACAAGGC TTGCAACCGT TTCTGAGTTT TCCAAACAAG ATCTGGTAAA AACATACAAC
ATTCCGGCAG ATAAAATTGA TGTGGTATAC AATGGCTGCA ATGCAGCATT CAAGCCAATT
CCGGAAGCAG AACAAGTAAA GGTTCGTTAT AAACATTCAG CTGGCAGACC GTTTTTCCTG
TATATAGGAT CCATGCATCC GCGCAAAAAC ATCTTAAACT TAATGAAAGC GTTTGAGGTG
TTTAAGAAAA TGACAAACTG CGACATGAAA TTGCTTCTGG TTGGTAAAGC CATGTGGAGC
AATAAAGATA TTCAATCGTT GTATCATACG CTTATTTACA GACACGACAT ACATTTTTTA
GGTCACATAA AAACAGCTGA ACTGGCCAGG ATTATGGCTT CGGCGCACGC GCTTACATTC
GTTCCGTATT TTGAAGGATT TGGTATACCT ATACTGGAAG CGTTGAACTG CGGCGTCCCT
GTTATCACAT CCAATACAAC TTCGTTACCG GAAGTTGCCG GGAAAGCAGC CTTATTAGTT
AATCCTGAAT CTTCAGAAGC TATAGCAAAT GCTATGATTC AGATCTATAA AGCACCGCAT
ATAAGAGAAA AATTACTTGC ACAAGGAGTT ATTCAGCGTC AAAAATTTTC ATGGGACAAA
ACAGCCGCAT TGCTTTGGGC AAGTTTTGAA AAAATGATGC GCTAA
 
Protein sequence
MNIAVNTRLL LEDRLEGIGW FTYETLKRIT EQNPQHTFHF FFDRPYNDKF VFGKNVVPHV 
LFPQARHPFL WYIFFEWSIP FMLRKVKADA FISTDGYMPK SSKVKVLNVI HDINFEHRPQ
DLPKRVANYY KKNMPLFAQK ATRLATVSEF SKQDLVKTYN IPADKIDVVY NGCNAAFKPI
PEAEQVKVRY KHSAGRPFFL YIGSMHPRKN ILNLMKAFEV FKKMTNCDMK LLLVGKAMWS
NKDIQSLYHT LIYRHDIHFL GHIKTAELAR IMASAHALTF VPYFEGFGIP ILEALNCGVP
VITSNTTSLP EVAGKAALLV NPESSEAIAN AMIQIYKAPH IREKLLAQGV IQRQKFSWDK
TAALLWASFE KMMR