Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0927 |
Symbol | dnaG |
ID | 4184115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1062115 |
End bp | 1064076 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638070926 |
Product | DNA primase |
Protein accession | YP_677546 |
Protein GI | 110637339 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.584516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.012532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTTTAA CCAAAGATAC AATAGACCAG ATTCAGCAAT CCATCGACGT TGTCGAGGTG ATTAGTGATT TCGTTTCATT GAAACGCAAA GGGCATTATT ATAGTGGGTG CTGTCCGTTT CACAACGAGA AAACACCTTC CTTCACGGTA ACACCGGCCA AAGGAATTTA CAAGTGCTTC GGATGCGGAA AAGGCGGTGA CGCCATTCAG TTCATCATGG AACATGAAGG TGCTTCGTAT GTGGAAGCAA TGGCCTATAT GGCTAAAAAA TACAACATCG AAATCAAGGA AGAAGAGCTG TCTGAAGAAC AGAATTTTGA GCAGAGCGAA AAAGATTCAA TGTTGGTTGT TACCAATTAT GCAAGTCAGT ATTACACAGA TCAGCTCTGG AACTCGGAAG ACGGCAAGTC CATTGGACTG AGTTATTTTA AAGAGCGTGG ATTCAGAGAA GAAACCATTA AAAAATTTGA ACTTGGTTAC AGTCATGACC AATGGGATGG TTTTACAAAA AATGCCATTG AAAAAGGATA TAAAACAGAG TTTTTAACCA AGACAGGTCT TAGCATTGAG CGTGACAATG CCAATGAAAA CAGTGAAAAG AAATTTTTTG ATCGTTTTCG CGGCCGGGTT ATGTTTCCGA TCCACAACGT GGCCGGGAGA GTTACCGCGT TTGGTGCCCG GATACTCAAA GCAGATAAAA CACAGGCAAA ATACCTTAAC TCCATTGAGT CGGTTATATA TCATAAGAGT AAAATTCTCT ATGGTTTATT CCAGGCCAAA CAAGCGATCC GCAAGGAAGA AGAATGTTTG CTGGTTGAAG GTTATACCGA TGTTATTTCG CTGCATCAAT CGGGGGTTGA AAATGTTGTG GCGTCAAGTG GCACCTCGCT TACAGAAGAC CAGATCAAAC TGGTAAAGCG GTACACACCT AATATCACGA TCTTATATGA TGGCGATGCA GCCGGTTTAA AAGCATCGCT GCGAGGCGTT GACCTGATCC TGCAGCAGGA TATGAATGTG TCTATTGTTG TATTCCCGCA AGGCGAAGAT CCCGATAGTT ATGTGCAGAA GATTGGTCCC ACGGCTTTTA AAGACTATAT AAAGTCGAAT AAAAAAGATT TTATTTCTTT TAAAACAGAA ATCAGTTTAA AGGAAATAGG GAATGATCCG ATCAAGCGGG CAGAGGTGAT AAAAGATATT GTAGAAAGTA TTTCTAAAGT CCCGGATGCG ATCAAACGCT CTGTTTTTTT TAGGGAATGC AGTAAATTAC TGGAGATAGA TGAGCAGATC CTCATTTCTG AATACAATAA AAAAGCCATT CAGAAAGGGA ATCAGGAAGC TAAAAAGTGG GAAGAAGACC GCCATGCGCT GGCTGAACTT CAGGCAATTC CGGATATTGA ATTGCCCGAT GATATTGTCC GGTTAAGTAT TGAAGAAGAA TCGCTGAAGC TTCATGAACG GGATATGATG CGCTACCTGA TCAATTATGC TTCTTCACCG ATGGAGCAGG AAATGCCGCT GTCTGACTAT CTGATACATG AATTGCAGGA CGTGGAATTC AAAAACCCGG CATACGATTA CATCATTAAA AAAATCATCG ATACCCGGTT GAATGGCAAT ACCGTGCTGC ATACGGATTT TCTGCAGCAG GATCAGCCCC AATATGTTCG GGATGCAGCC ATAGACCTGC TCTCTACCAA GTTTCAGCTC AGTGATAACT GGGAGAAATT TCAGATTGAT GTACCCAAGG AAATAGATGT GTTAAACTCT GTAGTGCCTA AAACCGTATT AAGGCTTAAA CGTGTTATCC TTAAATGTAT GATGCGTGAC AATATCAAAG AAATTGAACG GATTCAGAAG GATGGAAGTA ATGAAGAATT GATGCATTTA CTTCAGGTCG CAATGGAATT AAAGACGATT TCCAAAGATA TTGATAAGAC GCTTGGTATT GTAGTCGGGT AA
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Protein sequence | MRLTKDTIDQ IQQSIDVVEV ISDFVSLKRK GHYYSGCCPF HNEKTPSFTV TPAKGIYKCF GCGKGGDAIQ FIMEHEGASY VEAMAYMAKK YNIEIKEEEL SEEQNFEQSE KDSMLVVTNY ASQYYTDQLW NSEDGKSIGL SYFKERGFRE ETIKKFELGY SHDQWDGFTK NAIEKGYKTE FLTKTGLSIE RDNANENSEK KFFDRFRGRV MFPIHNVAGR VTAFGARILK ADKTQAKYLN SIESVIYHKS KILYGLFQAK QAIRKEEECL LVEGYTDVIS LHQSGVENVV ASSGTSLTED QIKLVKRYTP NITILYDGDA AGLKASLRGV DLILQQDMNV SIVVFPQGED PDSYVQKIGP TAFKDYIKSN KKDFISFKTE ISLKEIGNDP IKRAEVIKDI VESISKVPDA IKRSVFFREC SKLLEIDEQI LISEYNKKAI QKGNQEAKKW EEDRHALAEL QAIPDIELPD DIVRLSIEEE SLKLHERDMM RYLINYASSP MEQEMPLSDY LIHELQDVEF KNPAYDYIIK KIIDTRLNGN TVLHTDFLQQ DQPQYVRDAA IDLLSTKFQL SDNWEKFQID VPKEIDVLNS VVPKTVLRLK RVILKCMMRD NIKEIERIQK DGSNEELMHL LQVAMELKTI SKDIDKTLGI VVG
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