Gene CHU_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0897 
Symbol 
ID4186365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1025313 
End bp1026371 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content35% 
IMG OID638070897 
Productacyltransferase family protein 
Protein accessionYP_677518 
Protein GI110637311 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000451682 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATG ATTTGAAACA ACCAGCAGCA GACAATAAGT TTTATTTCTT AGAACTTATG 
CGCACATTAG CTGCATTATA TGTTGTTGGT GTTCATATCC ATCAGATTGT TGATTTTGGC
AAGATCGGCT CAATGCTTTT TGCATTTGGA CAGGAGGCGG TTATGATTTT TTTTGTGTTA
TCAGGCTTTG TAATTTATTA TTCTGCAGAA AATAAAAAAA CACTTACAAT TCCTCAATAT
TTCAAAGCGC GTTTTCTACG TATTTACCCT GTATTTATTC TTGCATGTTT GTTAACCTAC
GTTGCTAAAT CTTTTATATC AGATGAGTGG CTGGATTTTC AATGGATTTC ATTTCTTGAG
AACATATGTA TGCTTCAGGA TTTTTCAACC GGTAAGCCTG GCGTATGGAT ACAGCCATTT
ATGGGTAATA CACCTTTATG GTCATTGAGT TATGAATGGT GGTTCTATAT GCTTTTTATT
CCCATCTATT TTTATATTCC TGAAAATCGG AGGTATTTAT ATGTTGGGAT AATTTCCTCC
GCGGCATTGG TCGTTTATCT GATTTTTCCC AATCAGATTT GTCTTTGGCT TAGTTACTTC
ATATTATGGT GGCTTGGAGC AGAAGTATCA AGGAAGCATA TGCAGCCTGA TTCTGTAAAC
CTCAACACAC TTAAAAAAAC ACTTTTTATC ACAGCTGCCT TACTGGTTTT ATTGCTTGTA
TATCTGCTAT ACTGGAAAAC AGACCACACA ATTTTATTTG GATTATTTCC TGTATTATTT
ATAAGACATT TTGTAGCTTC TATGATCTTT GTTACGGTAT TGTGGAACAT ATCAAAGAAT
ACGTTTAATA TCGGTTCTGC AAACCTGCTG GTCCGTCTTG CTCCATATAC CTATGCGATA
TATGTTTTCC ATTACCCGGT CTTGTTGATG TTCGAAAAAA CAGGATGGAT ATTCAGCATC
TGGGGAATGG CTGCTTCTTT AGTTGCCATG CTTTTATTAG CAATAATTGC AGAAGAGGTT
TTTCAGAAGA ATATTGTTCG GTGGTTTAAG AAGATATAA
 
Protein sequence
MNNDLKQPAA DNKFYFLELM RTLAALYVVG VHIHQIVDFG KIGSMLFAFG QEAVMIFFVL 
SGFVIYYSAE NKKTLTIPQY FKARFLRIYP VFILACLLTY VAKSFISDEW LDFQWISFLE
NICMLQDFST GKPGVWIQPF MGNTPLWSLS YEWWFYMLFI PIYFYIPENR RYLYVGIISS
AALVVYLIFP NQICLWLSYF ILWWLGAEVS RKHMQPDSVN LNTLKKTLFI TAALLVLLLV
YLLYWKTDHT ILFGLFPVLF IRHFVASMIF VTVLWNISKN TFNIGSANLL VRLAPYTYAI
YVFHYPVLLM FEKTGWIFSI WGMAASLVAM LLLAIIAEEV FQKNIVRWFK KI