Gene CHU_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0893 
Symbol 
ID4186361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1021087 
End bp1022223 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content35% 
IMG OID638070893 
Productacyltransferase family protein 
Protein accessionYP_677514 
Protein GI110637307 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0030172 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGGCG TAATAACAAA ACAAAAGATC CGCGGGCTTG ATGAATTAAG AGGTATTGCA 
GCCGTGATGA TTGTGATCTA TCATATTTAT CAATCCTATT TCAGAGGCAT ACCTAATTAT
AATGCAGAAG GTGTTCTGGT TTTTCCGGAA ACATTCAACC CCAATTACAA CATATTGAAT
GAATTGAGCG CCGGTGTAAA TCTTTTTTTT GTACTGAGCG GATTCCTTAT TCATTTATTA
TATGCCAATA AATATTTTGA CTGGCAGGCT TCAAAAGTAT TTCTATCAAA ACGCTTATTC
CGGATTCTGC CCCCTTATTA TGCCTCTGTA GCTATAGCTC TGGCAGGCGG CTTGGTGATC
AGTTATTTGA AAATAGACAT ATGGAATGTG CTTATGCATG TGCTTTGCAT TCATAATTTT
GATTATGGAT ATGCTTTCAG CATTCAGGCA GTTTACTGGT CTATTGCTGT AGAAGTACAA
TTTTATATTC TGTATTGCAT GTATCGTTTT ATAGCCGACA GATATACAAT TGAACATAAA
CTTTTATGGT TTTTTGCATT CTGCTTAACT GTTTCAGTAA TATATAAATT AGTGCTTTAT
CTGAGCATTG ATAATGTAAC AATAAGTAAT GCAGGAATGC GATGGCTAAT GTTGTATAAC
ACAATACTTC GTTTTCCGGA ATGGTTACTA GGCGCATTGT TTTTTGAATA CTTGCCGCTT
ATAAAAAAAA TCAAATATAA ATATGTGTGG ATTTTGCTAC TGTTAGTTTT TACAACAGTA
TTGAACCATT ATTTTGTGTG GCATGTATTC GGATCCGATC TGGTGTATTC AATTGCATTT
TCTTTACTTA TTGTATCGTT AACAGATTTG AAAAAGGATG TGGCTCTGTT TGTGTTCCTT
GGCAATATTT CATATTCACT TTATTTAAAT CATTTTCTTA TTTATTCAGT GTGGGATACA
GCATGGCTCC GATTACTTCA TCTGCCTCGC GTTGCTTCTG CAGAGCGTAT ATTGATTATG
GTTTCAGGGT TCTTTGTATG TATTGCAGGA AGTTATATAC TGTACAGGCT TATTGAAAAA
CCTGCCATGA ATTTGAAATC AGTATGGGTA GATGCTAAAT CAGAAAAAAA ATCGTAA
 
Protein sequence
MGGVITKQKI RGLDELRGIA AVMIVIYHIY QSYFRGIPNY NAEGVLVFPE TFNPNYNILN 
ELSAGVNLFF VLSGFLIHLL YANKYFDWQA SKVFLSKRLF RILPPYYASV AIALAGGLVI
SYLKIDIWNV LMHVLCIHNF DYGYAFSIQA VYWSIAVEVQ FYILYCMYRF IADRYTIEHK
LLWFFAFCLT VSVIYKLVLY LSIDNVTISN AGMRWLMLYN TILRFPEWLL GALFFEYLPL
IKKIKYKYVW ILLLLVFTTV LNHYFVWHVF GSDLVYSIAF SLLIVSLTDL KKDVALFVFL
GNISYSLYLN HFLIYSVWDT AWLRLLHLPR VASAERILIM VSGFFVCIAG SYILYRLIEK
PAMNLKSVWV DAKSEKKS