Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0886 |
Symbol | |
ID | 4185238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1013022 |
End bp | 1014098 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638070886 |
Product | acyltransferase family protein |
Protein accession | YP_677507 |
Protein GI | 110637300 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000218499 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGGA ACACTTCTAT CTATCTTGAT TTTCTCAGAG TAATCTCTGC TTTAGGTGTA GTAATATGTC ATGCAAACAT GTCTTTTTTT TCAATAGGCT TAAATCTTTG TAATGGCGAG TTTGGACATA AAATGGTAGT GGTCTTTTTC GTATTGTCAG GTTTTCTTAT TGCCTATACT ACAGAAGTGA AAAATAAAGA TTTACATGGA TACATTATTG ACCGTATATC CCGCTTATAT CCTGTAATAA TTCCTGCATT GCTTTTAACA TTTATTATTG ATCAGATCGG ATACCAGTTT GATCCAGGTT ACTATGGTCC GTATATACAT ACTGCATCAT ATTACGCTAA ATACTTTATA ACTTTTTTTA ATCTGAATGA GATTTGGTTT TCATCTGCCA AGCCTCCTAC AAATGCACCT TTCTGGTCAT TAGCATATGA AGTCTGGTAC TATATTATTT TTGCTGTATG GATCTATGCC GTTAAGTGGA AACGGTATAT TTTACTTGCC TTAATATTTT TATGTATTGG ATACAAAATA GTATTATTAT TCCCAATCTG GTTAATGGGA GTTGCTCTTT TTAAACTTTC AAAGCATACT GTTTCAACTA TTTTTTCTGT TTTATTATTT GTTGCAACCA GTATATTAAT CATTGGTTTG GTTACTGAAA ACATACATCC TGTATTTCCT GTAGTAAGCA GGATTGGAGA TCCATATTTC TTTTATTCAT ATGATTTTTT AAATGATATT TTGTTAGGGG CGATTGTATG CCTGAATATA TTTGCAGTGA ATTCGTTCAA CAGAAGTCTA ATAGATGAAA ATAATTTTTT GATCGTAAAA ATAAAATGGT TTTCATCTGT AACTTTTTCT GTATACCTGT TCCATTTTCC AGTAATGATT TTATTCGGGG TTTTAGGATT TTATAATAAA GAGAGTGTAT TGGAAGTCCT AATATTAGTA TTGGGGATTG TAGTATTCTG CTGTTTTTTG GGGTATTATA CCGAACAAAA AAGATTTGTG TTTAAAAAAA TTCTGGAAGA AAAATACCGC AAGTATTTAT TGAAAATAAA TCAATAG
|
Protein sequence | MNRNTSIYLD FLRVISALGV VICHANMSFF SIGLNLCNGE FGHKMVVVFF VLSGFLIAYT TEVKNKDLHG YIIDRISRLY PVIIPALLLT FIIDQIGYQF DPGYYGPYIH TASYYAKYFI TFFNLNEIWF SSAKPPTNAP FWSLAYEVWY YIIFAVWIYA VKWKRYILLA LIFLCIGYKI VLLFPIWLMG VALFKLSKHT VSTIFSVLLF VATSILIIGL VTENIHPVFP VVSRIGDPYF FYSYDFLNDI LLGAIVCLNI FAVNSFNRSL IDENNFLIVK IKWFSSVTFS VYLFHFPVMI LFGVLGFYNK ESVLEVLILV LGIVVFCCFL GYYTEQKRFV FKKILEEKYR KYLLKINQ
|
| |