Gene CHU_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0886 
Symbol 
ID4185238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1013022 
End bp1014098 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content31% 
IMG OID638070886 
Productacyltransferase family protein 
Protein accessionYP_677507 
Protein GI110637300 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000218499 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGA ACACTTCTAT CTATCTTGAT TTTCTCAGAG TAATCTCTGC TTTAGGTGTA 
GTAATATGTC ATGCAAACAT GTCTTTTTTT TCAATAGGCT TAAATCTTTG TAATGGCGAG
TTTGGACATA AAATGGTAGT GGTCTTTTTC GTATTGTCAG GTTTTCTTAT TGCCTATACT
ACAGAAGTGA AAAATAAAGA TTTACATGGA TACATTATTG ACCGTATATC CCGCTTATAT
CCTGTAATAA TTCCTGCATT GCTTTTAACA TTTATTATTG ATCAGATCGG ATACCAGTTT
GATCCAGGTT ACTATGGTCC GTATATACAT ACTGCATCAT ATTACGCTAA ATACTTTATA
ACTTTTTTTA ATCTGAATGA GATTTGGTTT TCATCTGCCA AGCCTCCTAC AAATGCACCT
TTCTGGTCAT TAGCATATGA AGTCTGGTAC TATATTATTT TTGCTGTATG GATCTATGCC
GTTAAGTGGA AACGGTATAT TTTACTTGCC TTAATATTTT TATGTATTGG ATACAAAATA
GTATTATTAT TCCCAATCTG GTTAATGGGA GTTGCTCTTT TTAAACTTTC AAAGCATACT
GTTTCAACTA TTTTTTCTGT TTTATTATTT GTTGCAACCA GTATATTAAT CATTGGTTTG
GTTACTGAAA ACATACATCC TGTATTTCCT GTAGTAAGCA GGATTGGAGA TCCATATTTC
TTTTATTCAT ATGATTTTTT AAATGATATT TTGTTAGGGG CGATTGTATG CCTGAATATA
TTTGCAGTGA ATTCGTTCAA CAGAAGTCTA ATAGATGAAA ATAATTTTTT GATCGTAAAA
ATAAAATGGT TTTCATCTGT AACTTTTTCT GTATACCTGT TCCATTTTCC AGTAATGATT
TTATTCGGGG TTTTAGGATT TTATAATAAA GAGAGTGTAT TGGAAGTCCT AATATTAGTA
TTGGGGATTG TAGTATTCTG CTGTTTTTTG GGGTATTATA CCGAACAAAA AAGATTTGTG
TTTAAAAAAA TTCTGGAAGA AAAATACCGC AAGTATTTAT TGAAAATAAA TCAATAG
 
Protein sequence
MNRNTSIYLD FLRVISALGV VICHANMSFF SIGLNLCNGE FGHKMVVVFF VLSGFLIAYT 
TEVKNKDLHG YIIDRISRLY PVIIPALLLT FIIDQIGYQF DPGYYGPYIH TASYYAKYFI
TFFNLNEIWF SSAKPPTNAP FWSLAYEVWY YIIFAVWIYA VKWKRYILLA LIFLCIGYKI
VLLFPIWLMG VALFKLSKHT VSTIFSVLLF VATSILIIGL VTENIHPVFP VVSRIGDPYF
FYSYDFLNDI LLGAIVCLNI FAVNSFNRSL IDENNFLIVK IKWFSSVTFS VYLFHFPVMI
LFGVLGFYNK ESVLEVLILV LGIVVFCCFL GYYTEQKRFV FKKILEEKYR KYLLKINQ