Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0865 |
Symbol | |
ID | 4184224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 988658 |
End bp | 989533 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638070867 |
Product | hypothetical protein |
Protein accession | YP_677488 |
Protein GI | 110637281 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00896887 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0682028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACCCG TAGTCTTTAT TCATAAAGGT AATAGTTCAT ATCTGTATAA TACATTATAT CAGCTTAGAC AGACCAATCC GCTGGTTAAG ATGTATCTGC TGGGTACGGA AGAGTCGCGC GTGTATGAGC CACTTGCTGA AACGATACTG ATCGGGTCAT TATCTGAAGA AGCAGATTTG TTTGCAGGTG TTTATAAGCA TTACAGCACC AATTCAGAAT CATTTGAATT GATGTGTATT CAACGCTGGC TTGTACTTAA AGCATTTATG ATTAAAAAAG ATATCCGGCG TTGCCTCTAC CTGGATTCAG ATGTATTGGT ATATGAGGAT GTACAACGGT TATCTGATGC ACATGCACAT GTGGGCATGA CGTTGTGCGG TATTTCCGGA CATACAAATT TTGTTGATAG GAATGTACTG ATTGATTTTT GCGCGTTTAT TTTTGATCGT TATGCAGGGG CAGATGCATT AAGCGCGCTG GAAAAACATT ATCACGCGTT TGTCGCTAAG CATGGTGCCG GCGGTGTGTC AGATATGACC TTGCTTACAA TGTATGCCGA GAAAAATCCG CAAAAAGTTG AAAATATATA TTTCAGTAAT GGCCTTCCTA CCTTTGATCC CTCGCTGGAA GTAGGGGAAG AATATTTTGA AATGGAGAAC GGTCAAAAGA AAATCCTGTT TAATGATTCT AAACCTTATG GATTCTTGAA AGCAGAACAG AAACCGGTTT TGTTTTATAC GCTCCATTTT CAGGGTGCAA AAGCCAAAAG TATGATGCTG AAGTATATTC CGGTAAAGTC GGTTCTGTTT TGGATTCAGT ATATAAAATA TACCGGTATG TATTATTTTC AGAAAATAAA AAGCAAAATC GTTTAA
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Protein sequence | MIPVVFIHKG NSSYLYNTLY QLRQTNPLVK MYLLGTEESR VYEPLAETIL IGSLSEEADL FAGVYKHYST NSESFELMCI QRWLVLKAFM IKKDIRRCLY LDSDVLVYED VQRLSDAHAH VGMTLCGISG HTNFVDRNVL IDFCAFIFDR YAGADALSAL EKHYHAFVAK HGAGGVSDMT LLTMYAEKNP QKVENIYFSN GLPTFDPSLE VGEEYFEMEN GQKKILFNDS KPYGFLKAEQ KPVLFYTLHF QGAKAKSMML KYIPVKSVLF WIQYIKYTGM YYFQKIKSKI V
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