Gene CHU_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0853 
Symbol 
ID4184212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp977174 
End bp978151 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content35% 
IMG OID638070855 
Productb-glycosyltransferase 
Protein accessionYP_677476 
Protein GI110637269 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0180683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.20304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAG ATACTCATAC ATATCCTAAA ATATCTATCA TTACACCAAG TTATAATCAG 
GGAGCGTTTA TAGAACGTAC AATCAAATCG GTTCTGGAAC AAAACTACTC AAACCTTGAA
TATATTATTG TTGATGGAGG AAGTACGGAT AATACGGTTG AGATTATAAA AAAATACCAG
GATAAGATTC ACTACTGGAT AAGTGAAAGA GATAAGGGGA CATATGAAGC AAATAATAAA
GCATTAGAAA AAGTTACGGG CGATTTTTGG TGTGTGGTTA ATTCAGATGA TCTTCTGGCA
GAAGGAGCTC TGGAAAAAAT TGCAGCGCAC ATTCAACGTA ATCCTGAATC AAAATGGTTT
GCAGGTGGTA TAGATTATAT AGATGAAAAT GATGCTGTAA CAGGGCACTT TATACCTGAA
AAACCAGAAG CTGTTAACGG CTTTACATTT ATAGATGGAT GCTGGATATC ACATCCCGCA
GTTTTTTTGA GTAGCGATCT GATCAATACA ATTGGTAAAT TTGAAAAGTA CCATTTGATG
GATTTGAACT ATTGGCTTCG TATGGAATTG CAAGGGTATT CACCTTTCAT TGTGCATACA
TCGCTGGCCG CACTTAGACT GCATAAGGAT TCTAAAAGTG CAGACCGCAT AAAATTACAC
GCAGAATTTT TAAAAGTATT ACATACATTT ATCGTTCAGA ATAAGTTAAA CCGTTTTAAT
GCAATACTTC GTACTTATAA TTTTCATGTT AGAAATTATA TGCGCGTAGT TTTTTATGAA
ACGTTGGTAA CCGGCAATAA GAAATCGGCA TGGAGCCAAT TCATTGATCT GACAGTTAAA
TTTCCGAGTT CAATTGTAAC CAGATGGTAT TGGGGAGGTG TAAAACGATT GATGCTGGGT
GTGTCTTCAA CGGATCTGTT ACGAAAAGAT TTTTTTGAAA AAGAAAATAA TAGCAACTGG
AACAATCTGG ATGAGTAA
 
Protein sequence
MNQDTHTYPK ISIITPSYNQ GAFIERTIKS VLEQNYSNLE YIIVDGGSTD NTVEIIKKYQ 
DKIHYWISER DKGTYEANNK ALEKVTGDFW CVVNSDDLLA EGALEKIAAH IQRNPESKWF
AGGIDYIDEN DAVTGHFIPE KPEAVNGFTF IDGCWISHPA VFLSSDLINT IGKFEKYHLM
DLNYWLRMEL QGYSPFIVHT SLAALRLHKD SKSADRIKLH AEFLKVLHTF IVQNKLNRFN
AILRTYNFHV RNYMRVVFYE TLVTGNKKSA WSQFIDLTVK FPSSIVTRWY WGGVKRLMLG
VSSTDLLRKD FFEKENNSNW NNLDE