Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0853 |
Symbol | |
ID | 4184212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 977174 |
End bp | 978151 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638070855 |
Product | b-glycosyltransferase |
Protein accession | YP_677476 |
Protein GI | 110637269 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0180683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.20304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAG ATACTCATAC ATATCCTAAA ATATCTATCA TTACACCAAG TTATAATCAG GGAGCGTTTA TAGAACGTAC AATCAAATCG GTTCTGGAAC AAAACTACTC AAACCTTGAA TATATTATTG TTGATGGAGG AAGTACGGAT AATACGGTTG AGATTATAAA AAAATACCAG GATAAGATTC ACTACTGGAT AAGTGAAAGA GATAAGGGGA CATATGAAGC AAATAATAAA GCATTAGAAA AAGTTACGGG CGATTTTTGG TGTGTGGTTA ATTCAGATGA TCTTCTGGCA GAAGGAGCTC TGGAAAAAAT TGCAGCGCAC ATTCAACGTA ATCCTGAATC AAAATGGTTT GCAGGTGGTA TAGATTATAT AGATGAAAAT GATGCTGTAA CAGGGCACTT TATACCTGAA AAACCAGAAG CTGTTAACGG CTTTACATTT ATAGATGGAT GCTGGATATC ACATCCCGCA GTTTTTTTGA GTAGCGATCT GATCAATACA ATTGGTAAAT TTGAAAAGTA CCATTTGATG GATTTGAACT ATTGGCTTCG TATGGAATTG CAAGGGTATT CACCTTTCAT TGTGCATACA TCGCTGGCCG CACTTAGACT GCATAAGGAT TCTAAAAGTG CAGACCGCAT AAAATTACAC GCAGAATTTT TAAAAGTATT ACATACATTT ATCGTTCAGA ATAAGTTAAA CCGTTTTAAT GCAATACTTC GTACTTATAA TTTTCATGTT AGAAATTATA TGCGCGTAGT TTTTTATGAA ACGTTGGTAA CCGGCAATAA GAAATCGGCA TGGAGCCAAT TCATTGATCT GACAGTTAAA TTTCCGAGTT CAATTGTAAC CAGATGGTAT TGGGGAGGTG TAAAACGATT GATGCTGGGT GTGTCTTCAA CGGATCTGTT ACGAAAAGAT TTTTTTGAAA AAGAAAATAA TAGCAACTGG AACAATCTGG ATGAGTAA
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Protein sequence | MNQDTHTYPK ISIITPSYNQ GAFIERTIKS VLEQNYSNLE YIIVDGGSTD NTVEIIKKYQ DKIHYWISER DKGTYEANNK ALEKVTGDFW CVVNSDDLLA EGALEKIAAH IQRNPESKWF AGGIDYIDEN DAVTGHFIPE KPEAVNGFTF IDGCWISHPA VFLSSDLINT IGKFEKYHLM DLNYWLRMEL QGYSPFIVHT SLAALRLHKD SKSADRIKLH AEFLKVLHTF IVQNKLNRFN AILRTYNFHV RNYMRVVFYE TLVTGNKKSA WSQFIDLTVK FPSSIVTRWY WGGVKRLMLG VSSTDLLRKD FFEKENNSNW NNLDE
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