| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0831 |
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| Symbol | czcA |
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| ID | 4185736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 935883 |
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| End bp | 938981 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638070836 |
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| Product | cation eflux protein |
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| Protein accession | YP_677457 |
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| Protein GI | 110637250 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00269228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTT TTATATTATC TATTGTATCC TTTTCATTAA AGAATCGCTT CTTTATCTTT
TTTGCAACAG CGATTCTTGT TGTGTGGGGT ATAGTCAGTT ATTTAAATAC ACCCATCGAA
GCCTTTCCGG ACGTTACCAA TACACGTGTT CAGATCATTA CACAGTGGCC GGGCAGAAGT
ACAGAAGAGG TTGAGAAATT TGTTACCATT CCGCTGGAAG TAGAAATGAA TGCGATTCCG
GGTAAAACCA GCCTGCGTTC CATTTCCTTG TTCGGTCTTT CTGTTGTAAC CATCATGTTT
GATGATGATG TGGATGAATT TAAAGCACGC CAGTTAGTAG CCAACCGGTT AATCTCTGTA
GAAACCCCGG ATGGTGCATC TCCCGAGCTG CAGCCAAGTT ATGGTCCTAC GGGCGAAATC
TTCCGGTATA CATTAAAGGG CGATAATTTA TCTTCCAGAG ATTTAAAGAC TGTACAGGAT
TGGGTTGTTG AACGTAATTT AAAAGGTGTA CCTGGTATTG CTGATGTAGT AAGCTTTGGA
GGTGAAGTTA AAACATTTGA GATCAGTGTA GATCCGAACT TGTTACAGAA CTATAACATT
ACAGCTCTGG ATGTATTTCA GGCGGTGTCA AGAAGCAACG TCAATGTTGG TGGTGATGTT
ATTGAAAAGA ACGATCAGGC ATATGTTGTA CGGGGTATAG GTGTGCTAAA TAATCTGCGC
GAAATACAGA ATATTGTTAT TGATAATATT GATGGTACAC CGATACTTGT AAGCAATGTG
GCACACGTGC ATGAATCTGC TTTGCCGAAG TTGGGTTATG TAGGAAGAGA TACCATGCAG
AATCAGGTAG AAGGTATTGT GGTGATGCTG AAGAATGAGA ACCCAAGTGT TGTACTCGAA
AATCTGAAAG CAAAGATTGA TGAATTAAAC GAACACATTC TGCCGCGTAA TGTACAGATC
GTACCATTCT ACGACAGAAG TACGCTGATC GGTTTTACTA CCCATACGGT TATGAAAAAC
CTGATGGAGG GAATTTTCCT GGTTACGCTG ATTGTATTTG TCTTTATGGC CGACTGGCGC
ACAACGGTTA TTGTTGCTGT TGTTATTCCG ATTGCATTAC TGTTTGCCTT TATTTGTATG
CGTCTGAAAG GCATGAGTGC AAACCTGCTT TCCATGGGGG CGATCGACTT TGGTATCATT
ACCGATGGAG CTGTTGTAAT GGTGGAAGGT TTATTTGTAT TGCTCGATCA GAAGGCGCAT
AAGCTGGGTA TGACCAGGTA CAACGGCTTG TTGAAATTTG GATTGATTCG CAAAGAAGCA
GGTAAGCTGG GCAAAGCAAT CTTCTTTTCA AAATTAATTA TTGTTACGGC CTTGCTGCCG
ATTTTCGCTT TCCAGAAAGT GGAAGGTAAA ATGTTTTCGC CGTTAGCATA CACGCTTGGT
TTTGCGTTAT TGGGCGCTTT GATCTGCACC TTAACACTGG TGCCTGTTCT GGCGTCTTAC
CTGCTGAATA AAAACGTACG CGAAAAGCAT AACCCTGTTG TTAACTTTTT TGATAAGATT
GTGATGCGTG CGTTCAACGT TACGTTCCAC AATAAATTCA AGACGATGCT GGTTAGTATA
GGCATTGTTG CTTTCGGTTT GTTTTCCTAT ACATTTTTAG GAACAGAATT CCTTCCGGAG
TTAAATGAAG GCGCTATATA CATCCGTGCA AGTATGCCGA TGAGTACATC GCTGGAACAG
TCGATTAAGA TTTCTGAAAA AATGCGTAAG TCGCTGCTCA CCTTTGATGA AGTGAAAGGT
GTTATGTCAC AAAGCGGACG TCCGAATGAT GGAACAGATC CAACCGGATT TTTCAATATC
GAATTTCATG TGGATCTGAA ACAGGAAGGC GATTGGAAAC GAAAAATTTC CAAAGAAGAA
TTGATCGCGG AAATGAAGAA AAAGCTTCTG GAGTATCAGG GTATCTCATT GAACTTCTCA
CAGCCAATCA TGGATAACGT GGAAGAAGCC GTTTCGGGTG TTAAAGGTTC TTTGGCGGTA
AAAATTTACG GACATGATCC GAATGAACTG GAAGCAAAAG CAAACAGCGT ATATACGGTG
CTGAATACGG TTGAAGGCAT TGAAGATCTT GGGGTGATAC AATTGGTGGG CCAGCCGGAA
TACCACATTG ATCTGGATCA GCAGAAGATG GCTATCTATG GCGTGAGTAC AGCCGATTGT
CAATCGGTCA TTCAGATGGC TATTGGCGGA AAAGCTATTA CAAAACTGTA TGAAGGCGAA
CGCAAATTCG ATGTGCGTAT ACGATATATG CCACAGTACA GGATGTCCAG AGAGCAGCTT
GGAAGTTTGC TGGTACCTAC ACTTGGTAAT CAAAAGATTC TGTTGAAAGA AATTGCTACC
ATTTCAAAAG TTACCGGCCC TGCATTCCTG TACCGTGAAA ACAACGAACG TTTTGTAGCG
GTTAAATTTT CTATCCGGGG CCGTGATATG GGCAGTACCA TTGAAGAGGC GCAATCAAAA
GTGAATAAAA CAATAACGCT GGATAAAGGC ATGCGTATGG AATGGCGCGG TCAGTTTGAA
AACCAGGTAC GTGCAACCAA ACGTCTGATG CAGGTTGTGC CGATCAGCCT GGTATTAATC
TTTATTATTC TCTTTATCAT GTTTGGCACA GGTAAAGATG CCGGACTTGT TTTAATGAAT
GTGCCGTTTG CTTTAATAGG AGGGATCTGG GCATTGTGGA TTACGCAAAC AAACTTCAGT
ATTTCGGCCG GGGTTGGTTT TATTGCCTTG TTTGGTATTT GTGTTCAAAA TGGTGTAATT
CTTATATCCG TATTCAAACA AAAATTAATA GACGGAGAAG AACTGGATGC GGCAATTAAA
GAAGGGCTGC AGTCGCGTAT CCGTCCCGTA ATTATGACTG CGCTGATGGC TGCCTTAGGT
TTATTACCCG CTGCCTTATC TCATGGTATC GGTTCAGAAA CACAAAAGCC TCTTGCTATC
GTAGTCATTG GCGGCCTGGT AAGTGCAACC ATATTAACGT TGCTTGTATT CCCGATTATC
TGTCATTTCT TCTACAAACA TCCGGCATTG CGAAACTGA
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| Protein sequence | MNRFILSIVS FSLKNRFFIF FATAILVVWG IVSYLNTPIE AFPDVTNTRV QIITQWPGRS
TEEVEKFVTI PLEVEMNAIP GKTSLRSISL FGLSVVTIMF DDDVDEFKAR QLVANRLISV
ETPDGASPEL QPSYGPTGEI FRYTLKGDNL SSRDLKTVQD WVVERNLKGV PGIADVVSFG
GEVKTFEISV DPNLLQNYNI TALDVFQAVS RSNVNVGGDV IEKNDQAYVV RGIGVLNNLR
EIQNIVIDNI DGTPILVSNV AHVHESALPK LGYVGRDTMQ NQVEGIVVML KNENPSVVLE
NLKAKIDELN EHILPRNVQI VPFYDRSTLI GFTTHTVMKN LMEGIFLVTL IVFVFMADWR
TTVIVAVVIP IALLFAFICM RLKGMSANLL SMGAIDFGII TDGAVVMVEG LFVLLDQKAH
KLGMTRYNGL LKFGLIRKEA GKLGKAIFFS KLIIVTALLP IFAFQKVEGK MFSPLAYTLG
FALLGALICT LTLVPVLASY LLNKNVREKH NPVVNFFDKI VMRAFNVTFH NKFKTMLVSI
GIVAFGLFSY TFLGTEFLPE LNEGAIYIRA SMPMSTSLEQ SIKISEKMRK SLLTFDEVKG
VMSQSGRPND GTDPTGFFNI EFHVDLKQEG DWKRKISKEE LIAEMKKKLL EYQGISLNFS
QPIMDNVEEA VSGVKGSLAV KIYGHDPNEL EAKANSVYTV LNTVEGIEDL GVIQLVGQPE
YHIDLDQQKM AIYGVSTADC QSVIQMAIGG KAITKLYEGE RKFDVRIRYM PQYRMSREQL
GSLLVPTLGN QKILLKEIAT ISKVTGPAFL YRENNERFVA VKFSIRGRDM GSTIEEAQSK
VNKTITLDKG MRMEWRGQFE NQVRATKRLM QVVPISLVLI FIILFIMFGT GKDAGLVLMN
VPFALIGGIW ALWITQTNFS ISAGVGFIAL FGICVQNGVI LISVFKQKLI DGEELDAAIK
EGLQSRIRPV IMTALMAALG LLPAALSHGI GSETQKPLAI VVIGGLVSAT ILTLLVFPII
CHFFYKHPAL RN
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