Gene CHU_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0827 
Symbol 
ID4185967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp930902 
End bp931945 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content43% 
IMG OID638070832 
Productpeptidyl-arginyl deiminase 
Protein accessionYP_677453 
Protein GI110637246 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2957] Peptidylarginine deiminase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA ATACTCCAGC TCAACAAGGT TATTCGTTTC CGGCAGAATG GGCAAAACAT 
AAAGCAACCT GGTTAAGCTG GCCGCATAAG GAAGCTTCCT GGCCAGGTAA ATTAGACAGT
ATTTTTCCTC AGTATGCGCA GTTTATCAAA TTGATTGCTG AAGGTGAAGA AGTACGCATC
AATGTTGCCA ATGCTGCAAT GGAAGCTTTT GCCAGAGGAT ATATTGAAAA AGCAGGTGCA
GACATGCACA ATGTGTTTTT TCATCATTTC CCTACTAACG ATGCCTGGTG CAGAGATCAC
GGGCCTGCAT TCCTTGTAAA CCCGGCGGCA GAACAGAAAA AAGTAATTGT CGACTGGGGA
TATAATGCCT GGGGCGGCAA GTATCCTCCG TACGATCTGG ATGACGTTAT TCCTACAAAA
ATTGCACAGA TGTATAACAT TCCCGTGTTT CACCCGGGAA TTGTTATGGA AGGCGGATCG
GTAGAGTTTA ACGGCAGAGG TACATTACTG ACATCCACAT CGTGCTTATT GAATCCGAAT
CGCAACCCTT CAAAAAGCAG GGAACAAATA GAGGAATACC TGGAAGATTA TTACGGCGTG
GAACATATCT TATGGCTTGG AGAAGGCATT GTGGGAGATG ATACAGATGG CCATATTGAT
GACATTACAC GTTTTGTAAA TGAAGATACT GTAGTAACGG TTGTGGAAGA AAATAAAAGT
GACGACAATT ATTTTCTGTT AAAAGACAAC CTGAAAGACT TACATAAGAT GCGCCTGGAA
AATGGCAAGC AGTTAAACGT AATTGAATTG CCGATGCCTT CGGCTGTGAT CTATGATGAC
CAGCGCCTGC CGGCTTCTTA TGCAAACTTT TACATCAGCA ACAACCATGT TGTTGTGCCT
ACATTCAGAG ATAAAAATGA TGAAGTTGCG TTAGAGATAT TGCAACAGCT TTTTACCGAT
AGAAAAGTAA CCGGATTAGA TTCAACAGAT ATTATCTGGG GCCTTGGAAG CTTCCATTGC
CTGAGCCAGC AGGAACCTGC TTAA
 
Protein sequence
MNKNTPAQQG YSFPAEWAKH KATWLSWPHK EASWPGKLDS IFPQYAQFIK LIAEGEEVRI 
NVANAAMEAF ARGYIEKAGA DMHNVFFHHF PTNDAWCRDH GPAFLVNPAA EQKKVIVDWG
YNAWGGKYPP YDLDDVIPTK IAQMYNIPVF HPGIVMEGGS VEFNGRGTLL TSTSCLLNPN
RNPSKSREQI EEYLEDYYGV EHILWLGEGI VGDDTDGHID DITRFVNEDT VVTVVEENKS
DDNYFLLKDN LKDLHKMRLE NGKQLNVIEL PMPSAVIYDD QRLPASYANF YISNNHVVVP
TFRDKNDEVA LEILQQLFTD RKVTGLDSTD IIWGLGSFHC LSQQEPA