Gene CHU_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0815 
Symbol 
ID4185956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp919186 
End bp920214 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content29% 
IMG OID638070821 
Producthypothetical protein 
Protein accessionYP_677442 
Protein GI110637235 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00019991 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0541314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT TTACTGAAAT AACGCTTGAG TTTATATACA TCCATAAAGT TGGAAACAAG 
CTTAGGGATG AAGGAATCGA AGTATCCGAT AAAAAGCTAA GTTTAGGAAA CGAAGACACA
AAAAAATACT TGTTAAGGTA TTTTCTTTCT CCATTCAATA ATAATGAAGT TTATAATTTT
CATTATCCGA CAGACCTTAA TCTTAACGAT ACCTACGCTT TTGCTAAAAG GATTTTTGCA
AATCCAGAAA ATTTCTATGA ATTATCAATA GATGTTTCAA AGCATTTATA TGAAAAATCT
TCTCACCCCA AAATAAACGG AGGAGAGTTT TGTATTTGTT ATTTTAAAGA TTGTTTATTT
GAGGGGCAAC AAACTGATGC AATAGGCTTA TTTAAGTCTG AAAAAAAGGA CGTTTTTTTA
AAACTCACTT CTTCAAAAAT CGCACATGAA AGTGGAGTTA ATATTGATAA ATTAGACAAA
GGATGTTTAA TCTTCAATTT AGAAGAAAAA AACGGCTATA AAGTATGTGT AGTGGATTCA
AATAAATCAA ACGACACACA ATATTGGAAA GATGAATTTT TAAGTATAAA ACCTGCTAGT
GACAATTATC ATTTTACTAA AGATTTTCTT TCCATAACTA AGAACTTTAT TACAAAACAA
ATTCCTGAAG ACTTTGAGGT ATCTAAAGCA GACCAAATAG ACTTCTTAAA CCGTTCAGTC
GATTATTTCA AAAAACATGA CACTTTTGAT AAGCAAGAAT TTGAATCAGA GGTTTTTGCA
GACAGCAATG TTATTAAATC ATTTCGCAAA TTTGACCAAA TATATAGACA AGAAAACGAA
GTAGAGCTTT CAGACAATTT TGAAATATCT GCTCAAGCAG TCAAAAAGCA AGCGAGAGTT
TTCAAAAATA TTTTAAAGCT CGACAAAAAC TTTCACATAT ACATTCATGG AAATAGAGAA
CTAATAGAAC AAGGAATTGA CGAAAAAGGA CGTAAATATT ATAAAATATA TTACGAAAAT
GAAACTTAA
 
Protein sequence
MIDFTEITLE FIYIHKVGNK LRDEGIEVSD KKLSLGNEDT KKYLLRYFLS PFNNNEVYNF 
HYPTDLNLND TYAFAKRIFA NPENFYELSI DVSKHLYEKS SHPKINGGEF CICYFKDCLF
EGQQTDAIGL FKSEKKDVFL KLTSSKIAHE SGVNIDKLDK GCLIFNLEEK NGYKVCVVDS
NKSNDTQYWK DEFLSIKPAS DNYHFTKDFL SITKNFITKQ IPEDFEVSKA DQIDFLNRSV
DYFKKHDTFD KQEFESEVFA DSNVIKSFRK FDQIYRQENE VELSDNFEIS AQAVKKQARV
FKNILKLDKN FHIYIHGNRE LIEQGIDEKG RKYYKIYYEN ET