| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0801 |
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| Symbol | |
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| ID | 4183975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 903686 |
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| End bp | 904879 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070807 |
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| Product | a-amylase, glycoside hydrolase family 57 protein |
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| Protein accession | YP_677428 |
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| Protein GI | 110637221 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00227308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGTTCGG TTACGCTTTG TTTTCAGGTA CATCAACCTT TCAGGATCAA TCCATACACT
TTTTTTGATA TCGGGAAAAA TCATTCCTAC GAAGACGCCG CACATAATAA ATTAGTGGTT
GACCGCGTGG CCGACCTCTG TTATCTGCCA ACCAATAAGA TCCTTCTTCA ACAGATCAAA
AAATACAAAG GCTTGTTTCG TGTCGCTTTT TCCATCAGCG GTACAACGAT TGAACAATTC
AAGCTATACC GGCCCGATGT TATTGATTCA TTTATAGCAT TGGCGAAGAC CGACTGTGTA
GAGTTTCTTG CCGAAACCTA TTACCACAGC TTAAGCAGTA TTTTTTCAAA GGAAGAATTT
TTAATTCAGG TTGATACACA CCGCAAATTA ATACGTTCGA CATTTGGTTA TCAGACAGAA
GTATTCCGCA ATACCGAACT GATCCACAAC AACGACATTG CCGCAACTAT AAAAGAACTG
GGCTTAAAAG GCATGATTAC CGAAGGTGTA CAGAAATTGC TGGGCACCAT GAGTACTAAT
AAAGTGTATA GTCCGGCGCA TACATCCTTC CCTGTTATTC TGCGCAACTG TAAATTATCC
GATGATCTTG CCTTTCGTTT TTCTGATAAA AACTGGAAGG GGTATCCTTT GACAGTTGAA
AAATATACCT CCTGGATCAA AAAGAGCCTC AAAAAACATG AAAATGCGAC TATTTATGTC
GACTATGAGA CATTTGGTGA GCATCAGAAG AAGAATAGCG GTATCTTTAC GTTTCTGCGC
AAACTGCCCG GCATGCTGAT TGATACACAT GGTATTGATT TCATGACCCC TTCTGAGGTG
ATTGACAACC TGGAAATTCA TGATGTGTAT GATGCACATG AAACAATCTC CTGGGCGGAT
ATTGAAAAAA ATCTTTCTGC CTGGTATCAG AACAGCATGC AAAAAGAAGC GCTGGAAAAA
ATATACAGCC TGGAACCGCT GATCCGGAAA ATGCAAATCA GAAGACATAC CGATAAATGG
TCGAAACTTC AGACATCGGA TCACTTCTAT TACATGAGCA CCAAAGGCTA CAGCGATGGC
GAAGTACATC AATACTTCAG TCCGTTTGCA AGTCCGCATG ACGCCTACAT CCATTACATG
AATGTGGTTG CAGACTTTGA ACTGGAGATC AGGAAGAAGA AACTGTTTAA ATAA
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| Protein sequence | MRSVTLCFQV HQPFRINPYT FFDIGKNHSY EDAAHNKLVV DRVADLCYLP TNKILLQQIK
KYKGLFRVAF SISGTTIEQF KLYRPDVIDS FIALAKTDCV EFLAETYYHS LSSIFSKEEF
LIQVDTHRKL IRSTFGYQTE VFRNTELIHN NDIAATIKEL GLKGMITEGV QKLLGTMSTN
KVYSPAHTSF PVILRNCKLS DDLAFRFSDK NWKGYPLTVE KYTSWIKKSL KKHENATIYV
DYETFGEHQK KNSGIFTFLR KLPGMLIDTH GIDFMTPSEV IDNLEIHDVY DAHETISWAD
IEKNLSAWYQ NSMQKEALEK IYSLEPLIRK MQIRRHTDKW SKLQTSDHFY YMSTKGYSDG
EVHQYFSPFA SPHDAYIHYM NVVADFELEI RKKKLFK
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