Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0754 |
Symbol | msrB |
ID | 4183694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 852478 |
End bp | 852987 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638070760 |
Product | methionine sulfoxide reductase B |
Protein accession | YP_677381 |
Protein GI | 110637174 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.192538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA AGTTAACATC CATATTTCTT ACCGCTGGCT TGCTGATGAG TTTAACAGCC TGTTCGCAGC AGAAAGCACA GCCGATCAAA AAAACAGATA CCATACAAGC AACGTCAAAC ATGCCACTTA TGCCAATTAA AGATCAGTCC AATTATAATC CATTAACGCC GGAAGAAAAA TACGTAATCA TCAACAAAGG GACAGAGCGC CCTTTTACCG GTAAATACTA TAATTTTAAA GAACCTGGTA CATACATCTG CAAACAGTGT AATGCACCGC TGTACCGTTC TTCAGATAAG TTCGATTCAC ATTGCGGCTG GCCGAGTTTT GATGATGAAA TACCGGGTGC AGTAACACGT GTGCCAGACG CAGATGGAAG AAGAGTAGAA ATCATTTGTA CCAATTGCAA AGCACATTTA GGTCACGTAT TTGAAGGCGA ACGTATGACA GATAAAAATG TGCGCCATTG TGTAAATTCG ATTTCTATTG AATTTGTACC GGTGAAATAA
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Protein sequence | MKNKLTSIFL TAGLLMSLTA CSQQKAQPIK KTDTIQATSN MPLMPIKDQS NYNPLTPEEK YVIINKGTER PFTGKYYNFK EPGTYICKQC NAPLYRSSDK FDSHCGWPSF DDEIPGAVTR VPDADGRRVE IICTNCKAHL GHVFEGERMT DKNVRHCVNS ISIEFVPVK
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