| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0734 |
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| Symbol | rluD |
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| ID | 4185678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 830939 |
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| End bp | 831739 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638070740 |
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| Product | ribosomal large subunit pseudouridylate synthase |
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| Protein accession | YP_677361 |
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| Protein GI | 110637154 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTCTACTA CGATCAATCC ATATTTTACG AGTTTTAACG TTTCTATTGA CGCGTATACG
CTACCCGAGC GTTTTACCTA TCCGTTCCAG TATGTTCCGC ATCCGCTGAG TTTACTCGCA
GCAAAACAAT TGCAGGAATA TCTGGATACG CAAACCGTTT GGTCGCATAA TTTTGGTTTG
AATAAAGCCG AAGACCATAC AACGGTTATC GGAAAAATGT TTGGTGTGCT GGTTGTTGAA
ACAGCACAAA AAGAAATCGG TTTTTTATCT GCTTTTTCAG GAAAGCTGGC TAGCGGAAAT
CAGCATGCAG CGTTTGTGCC CCCGGTGTTT GATCTGCTTG CACCGACCGG TTTTTTGAAT
GGCGGCATGC AGCAGCTGAG TAAGATGAAT ACTGTTATTG AAGCCCTCGA ACAAACGTTG
GAACAGGAAT ACGTGATGCA GTTACAACAG TTAAAGGTGC AGCGTAAAGC ATTTTCCATT
GAACTGCAGA ATAAAATATT TGATCAGTAT TTTTTTCTGA ATCAGGCGGG AGAAGAAAAA
AGTTTGCGTG CCATTTTCAA AACGCGTTCA GATAATAATC CACCAAGCGG AGCAGGTGAG
TGTGCAGCTC CAAAACTGCT GCAATATGCT TTTCAACATC AAATGAAACC ATTGGCTCTG
GCAGAATTCT GGTGGGGACT TTCGCCCAAA TCCGACCATT GGAAACATGG CCATTTTTAT
CCCTGCTGCC ATGAAAAATG CAAACCTATT TTGGAACACA TGCTGGCAGG AATGCTGCTG
GATGAAAACC GTACGGAGTA A
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| Protein sequence | MSTTINPYFT SFNVSIDAYT LPERFTYPFQ YVPHPLSLLA AKQLQEYLDT QTVWSHNFGL
NKAEDHTTVI GKMFGVLVVE TAQKEIGFLS AFSGKLASGN QHAAFVPPVF DLLAPTGFLN
GGMQQLSKMN TVIEALEQTL EQEYVMQLQQ LKVQRKAFSI ELQNKIFDQY FFLNQAGEEK
SLRAIFKTRS DNNPPSGAGE CAAPKLLQYA FQHQMKPLAL AEFWWGLSPK SDHWKHGHFY
PCCHEKCKPI LEHMLAGMLL DENRTE
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