Gene CHU_0696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0696 
Symbol 
ID4186471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp794786 
End bp795793 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content36% 
IMG OID638070702 
Producthypothetical protein 
Protein accessionYP_677323 
Protein GI110637116 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCAG GTAAAGCATA TAAACTCTCA GAATTTCTTT TTTGGACAAG GAGAAACATC 
TACTGGCTTT TACTAATCGG CATTATGCCG GTTGTGTTGT ATCAAATTTT TAATTTGAAA
TTTATTGCAA TCCCCTGGAC GGTTGTAGCC TTATTAGGTA CAGCAACAGC ATTTATAGTG
GGTTTTAAAA ATACACAAAC ATATAATCGC ACCTGGGAAG CAAGACAGAT CTGGGGAGCA
ATTCTTAATA GCAGCCGCTC CTGGGGTACA ATAAGCAGAG ACTTTTTAGA TAATCCGGAA
AAATCAAAAG AACTTGTTTA TCGCCATTTT GCGTGGCTTA CAGCTTTACG TTATGCCATG
CGGGATAGCA GGTCCTGGGA AACCACTACT AAAGAATATA ACCAGGAGTA TAAAGCATTT
TATACAATCC CTGAAAAAGA AACAACTTTA GAAACAGAGT TAGAAAAATA TCTTTCAGCA
GATGAATTGA AATATATTTT AACAACTAAA AATAAAGCGG CACAACTATT AAGTTTACAA
AGTAAAACGA TTAAAGAATT ATATGATCGT AGGGCAATAG ATGATTATCG TTTTGTAGAA
ATGCAACGGG CAATCAGAGA TTTTTTTGAT CAGCAAGGAC GCAGTGAACG CATAAAGAAC
TTTCCTTATC CGAGACAATT CGCAACCATC AATTCATTAT TTATCAAACT GTTTTGCTTT
CTTTTACCAT TTAGTATGTT AAAAGAATTT GACAAATTGA ATGATGGTAT TACAGGCATG
CTCCAAGGTA ATATGGTTTG GTTTGTTATT CCATTCAGCG TTTTAATATC TTGGGTATAT
ACTTCGCTGG AGCAGGTGGG AGAGAGCACC GAAAATCCGT TTGAAGGAAG TGCAAACGAT
GTTCCTATTT CACAAATGAG CCGCACGATT GAAATTGACC TGAGGGAAAT GCTTGGAGAG
ACAGATTTGC CGCCATCATT ACAGCCAATC AATAATATTA TTTTGTAA
 
Protein sequence
MHSGKAYKLS EFLFWTRRNI YWLLLIGIMP VVLYQIFNLK FIAIPWTVVA LLGTATAFIV 
GFKNTQTYNR TWEARQIWGA ILNSSRSWGT ISRDFLDNPE KSKELVYRHF AWLTALRYAM
RDSRSWETTT KEYNQEYKAF YTIPEKETTL ETELEKYLSA DELKYILTTK NKAAQLLSLQ
SKTIKELYDR RAIDDYRFVE MQRAIRDFFD QQGRSERIKN FPYPRQFATI NSLFIKLFCF
LLPFSMLKEF DKLNDGITGM LQGNMVWFVI PFSVLISWVY TSLEQVGEST ENPFEGSAND
VPISQMSRTI EIDLREMLGE TDLPPSLQPI NNIIL