Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0674 |
Symbol | idi |
ID | 4184083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 773561 |
End bp | 774094 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638070680 |
Product | isopentenyl-diphosphate delta-isomerase |
Protein accession | YP_677301 |
Protein GI | 110637094 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1443] Isopentenyldiphosphate isomerase |
TIGRFAM ID | [TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.90735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAAAG AAGAGTACGT ATTATTGGTT GATGAGCAGG ATAATGAAAT CGGTTCCATG GAAAAGATGG AAGCACACCG GAAAGGACTG CTTCACCGGG CATTTTCTGT TTTTATTTTT AATACAAAAG GAGAATTACT ACTTCAGCAA CGTGCTGCTT CTAAATATCA CTCCCCATTA AAGTGGACCA ATACATGCTG CAGCCATCAG CGTAAAAACG AAACCACACT CCAGGCCGCA GCCCGTAGAA TGCAGGAAGA AATGGGTATC ACCTGCAACG TATCGCTTTC CTATACATTC ATTTATAAGG CAGATGTCGG ACAGGGTTTA TTCGAACATG AATTAGATCA TGTATTGATC GGTACAACAA CACAAACAAC TATTCCTTTT AATAAAAATG AGGTACATGC GGTACGGTTT GCTTCACTGG AAGATATAGA AAAAGAAATG AGCATTAATC CGGAAGACTT TACGAAATGG TTTTTAATAA CTTTTTCAGA TCTGAGAAAA TATATCAGCG AGCATCCTGT TTAA
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Protein sequence | MNKEEYVLLV DEQDNEIGSM EKMEAHRKGL LHRAFSVFIF NTKGELLLQQ RAASKYHSPL KWTNTCCSHQ RKNETTLQAA ARRMQEEMGI TCNVSLSYTF IYKADVGQGL FEHELDHVLI GTTTQTTIPF NKNEVHAVRF ASLEDIEKEM SINPEDFTKW FLITFSDLRK YISEHPV
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