Gene CHU_0674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0674 
Symbolidi 
ID4184083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp773561 
End bp774094 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content39% 
IMG OID638070680 
Productisopentenyl-diphosphate delta-isomerase 
Protein accessionYP_677301 
Protein GI110637094 
COG category[I] Lipid transport and metabolism 
COG ID[COG1443] Isopentenyldiphosphate isomerase 
TIGRFAM ID[TIGR02150] isopentenyl-diphosphate delta-isomerase, type 1 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.90735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAAG AAGAGTACGT ATTATTGGTT GATGAGCAGG ATAATGAAAT CGGTTCCATG 
GAAAAGATGG AAGCACACCG GAAAGGACTG CTTCACCGGG CATTTTCTGT TTTTATTTTT
AATACAAAAG GAGAATTACT ACTTCAGCAA CGTGCTGCTT CTAAATATCA CTCCCCATTA
AAGTGGACCA ATACATGCTG CAGCCATCAG CGTAAAAACG AAACCACACT CCAGGCCGCA
GCCCGTAGAA TGCAGGAAGA AATGGGTATC ACCTGCAACG TATCGCTTTC CTATACATTC
ATTTATAAGG CAGATGTCGG ACAGGGTTTA TTCGAACATG AATTAGATCA TGTATTGATC
GGTACAACAA CACAAACAAC TATTCCTTTT AATAAAAATG AGGTACATGC GGTACGGTTT
GCTTCACTGG AAGATATAGA AAAAGAAATG AGCATTAATC CGGAAGACTT TACGAAATGG
TTTTTAATAA CTTTTTCAGA TCTGAGAAAA TATATCAGCG AGCATCCTGT TTAA
 
Protein sequence
MNKEEYVLLV DEQDNEIGSM EKMEAHRKGL LHRAFSVFIF NTKGELLLQQ RAASKYHSPL 
KWTNTCCSHQ RKNETTLQAA ARRMQEEMGI TCNVSLSYTF IYKADVGQGL FEHELDHVLI
GTTTQTTIPF NKNEVHAVRF ASLEDIEKEM SINPEDFTKW FLITFSDLRK YISEHPV