Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0671 |
Symbol | ychM |
ID | 4184080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 770199 |
End bp | 771731 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638070677 |
Product | sulfate transporter |
Protein accession | YP_677298 |
Protein GI | 110637091 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.045325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAC AACTACAGCT TTTTGATTTT TCTCAAAAAA TACATTACCG GACAGAAATT CTTGCTGGCC TTACCGTAGC AATGACAATG ATTCCCGAAT CTTTATCATT TGCAATTCTT GCAGGCTTCC CTCCTTTGAT GGGCTTATAT GGCGCATTTA TAATGGGTAT TGTTACAGCT ATCTTCGGCG GCAGGCCAGG TTTAATTTCA GGTGGCGCAG GAGCTACCGT TATTGTTTTG ATTGCCTTAA TGAAATCGCA TGGTATTGAA TATGTATACG GTGCTATAGC ACTTGCCGGT ATTATTCAGA TCCTTATAGG TATTTTCCGG TTTGGGAAAT TTATACGTCT GGTTCCGCAA CCGGTTATGT TTGGTTTTGT AAATGGTTTG GCCATTATCA TTTTCATGTC TCAATTAAAT CAATTTCAAA CGGTTGTAAA TGGGCAAACA GAATGGCTTT CGGGTATACC TTTATTTATC ATGGCAGCAT TGGTTGCATT AACTATTATA ATCGTTTTGT TACTGCCCAG AATAACTAAA GCTATACCCG GTTCCTTAGC TGCCATTCTT ATTGTATTCG GAATCGTTAC TTTTTTCGGA ATAGACACCA GGCAGGTAAT TGATATTGCG TCTATAAGCG GTTCATTACC TCCTTTTCAT ATTCCTGCTA TTGATATATC CATCGAAAGT TTCAACATAC TCTTTCCATA TGCCCTGGTA ATGGCCGCCG TTGGATTAAC AGAAGGTTTG CTGACATTAA ATCTGGTTGA TGAAATTACA GGAACTAAAG GACGAAGCAA CAAAGAATGT ATTGCACAAG GTGGTGCAAA TATGCTGAAT GGGTTTTTCT CAGGCATGGG CGGCTGCCCG ATGATTGCGC AGACGTTGGT AAATCTTTCT GCCGGATCCA GAGCACGCCT GTCCGGTATT GTGGCAGCGC TTACAATCTT GCTGATTATA TTGATCGGCG CACCCGTTAT TGAACGCGTT CCGTTAGCAG CCCTTACAGG CGTTATGATT ATGGTTGCAG CAGGTACTTT TGAATGGGCC AGTTTTAAAG CAATCAGACG TATGCCCACT GCAGATATTT TTGTTATGGC AGTAGTAACA ATCATAACTG TTTTCTTACA TAATTTAGCC CTTGCTGTAT TAATCGGTGT TATTATTTCT GCCTTGGTAT TTGCCTGGGA AAGCGCAAAA CGTATCCGTG CACGAAAATT TATTGATGCG CATGGAGTAA AACACTATGA AATATACGGA CCATTATTTT TTGGTTCTAC AGCTAATTTC TCTGAAAAAT TTGATGTGCA GAACGACCCG GCAGAAGTTG TTATTGATTT TAAAGAAAGT AAAATTTCAG ACATGAGCGC CATTGATGCC GTTAATAAAA TAACAGAACG ATATGCCTCC ATCAATAAAA AAGTTCAGTT AAAACATTTA AGCGAAGATT GCCGGCTGTT ATTAAAAAAT GCGGACAGCT TAATTGAAGT AAATATTCTC GAAGACCCCA CGTACAAAGT AATGACAGAT TAA
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Protein sequence | MIKQLQLFDF SQKIHYRTEI LAGLTVAMTM IPESLSFAIL AGFPPLMGLY GAFIMGIVTA IFGGRPGLIS GGAGATVIVL IALMKSHGIE YVYGAIALAG IIQILIGIFR FGKFIRLVPQ PVMFGFVNGL AIIIFMSQLN QFQTVVNGQT EWLSGIPLFI MAALVALTII IVLLLPRITK AIPGSLAAIL IVFGIVTFFG IDTRQVIDIA SISGSLPPFH IPAIDISIES FNILFPYALV MAAVGLTEGL LTLNLVDEIT GTKGRSNKEC IAQGGANMLN GFFSGMGGCP MIAQTLVNLS AGSRARLSGI VAALTILLII LIGAPVIERV PLAALTGVMI MVAAGTFEWA SFKAIRRMPT ADIFVMAVVT IITVFLHNLA LAVLIGVIIS ALVFAWESAK RIRARKFIDA HGVKHYEIYG PLFFGSTANF SEKFDVQNDP AEVVIDFKES KISDMSAIDA VNKITERYAS INKKVQLKHL SEDCRLLLKN ADSLIEVNIL EDPTYKVMTD
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