| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0632 |
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| Symbol | prc |
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| ID | 4184968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 733843 |
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| End bp | 735960 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638070637 |
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| Product | C-terminal processing peptidase-1 |
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| Protein accession | YP_677258 |
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| Protein GI | 110637052 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.366246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGTT TTATTCTCTC CCGTATTCAA CTAATTGTTT TATTGCTGCT GACATTTGTA
GCAATTCCGG CATCTGCACA AACCAGTAAA ACAGAGCAGC CATCCTGTTC AAAAAAAACA
GATGCATTAT GGGTATTGCT AACTAAAAAA CATATTGCTC CGATACAATT CAATCATACT
GTTTCTGTAG AAATTGCAGA TTTGTTATTA ACGGAACTTG ATTATAAAAA AATACATTTC
TATGAATCAG ACAGACAAAA CTTATTAATA CAGATACAAA ATCTTAAACC TTCTTCTGCC
AAAGATCTTT GTACGCTGAT CGCCGGAATA TCTGAATTGT ATCAAACCAG AATAAAAGAA
AGCCAGGCTA TTCTTCAGAC GCTTGCCGCG AATGAATTGA ATTTCAGCGA AAATGAAATT
GTTACTTTTT CTTCTTCCAA AAGACAATTC ATGGAATCGA AAGAAAAAAA AATAAGCCGA
TGGAAACGGA ACATTAAATT TCTTGTATTG AATAATCTGT ATTACGCCGT CGACTCTGCA
CACAGCACCG ATGTTGCTGC CCCAAGCAAT TTTTTAGCAG ATAAAAATAA AATTACCCGT
ACGATTATTG ATAAGGAATT AAAAAAAATA AATGCATTAG CTGATCCTTC AACCGATTTT
ACTGCAACTG TTGAAAATGC CTTGCTGAAT GCAATCTGCA AGCGCTTTGA TCCGCATACG
GAGTATTATA ATTACACGGC ATTTAAAGAA TTTTCAGAAC ACCTGCAGTC GAAGGTCTTA
ACCTTTGGTG TATTTTTCGG AGAAACAGCA TTCGGAAATT TATCCATCCG TTACGTAGCG
CCGGGAAGTA CGGCATGGTT TTCCAATGTG ATACAAGAGA ATGATGTTGT ATTGTGGTTC
AAATTGAATC AGCAGGTGTT TGATGTATCT GCATTAACAC ACACAGAAGC GAATGCCTTG
CTTCAAAACG AAAAATATTC GCTTTTGGAA ATCGGTTTAA AAAAAGATAA CGGATCAAGT
GAGACGATTA AATTAAAACG TGAAGCAATA AAGTTTGAAA ACAATACCGT TAAAAGTTAT
ATCATTAAGG ATGCTAAAAA AATAGGTTAC ATATCTATTC CTTCTTTTTA TTCGGACGAT
TCAAATCCCA ATGCTTTAGG CGCTGCCAAT GAATTGTCGA AAGAAATTTT AAAATTAAAA
AATGAAAACA TTGAAGGATT AATCATTGAT CTGCGGAACA ATGGCGGAGG TTCTTTGTAT
GAAGCTGTTG GCATGTCAGG TTTATTTATC GACATAGGCC CGTTGTTTTA TGTTCTGGAA
CGCAGCGGAA AAGCAACTTT AACCAAAGAT ATGAACCGCG GTACCGTGTA TGACGGACCA
TTGTGCATTA TGGTGAATGG ATACAGTGCA TCTGCTTCAG AAATATTCAG TGCAGCCATG
CAGGACAATC ACCGTGCACT GATCGTTGGA GAACAAACAT ACGGGAAAGC TACCGGCCAG
AGTATTTCAC AGTTGGATAC AACAAAATCA ATCAGCACAT TTTCTGCCAC TGATAACATG
GGCGCGACGA AGATCACGGA AATAAAATTG TACCGCACAT CAGGCTTCAG CTACCAGGGT
AAAGGTGTAA CGCCCGACAT AATACTTCCG TATCTGGATG TATTATCTGA AAAAGAAAAC
ACAGAACCAT TTTATCTTAA AGGTGACTCG ATTGCCAAAA AAGCTGTTTT TGCATTTCCG
GAAGCGCTGC CTGTTGCATC CTTAAATGAG ATGAACAATA TACGGATAAA AGAAAACCCG
CAGTATAAGC AACTGAAACA TGTTTCGGAC TCGCTGCATA CAACACAAGA TGATGATATT
ATCATTCATT TAACTGCTGC AGGCTTCTGG AAAGACATGC GTATATTGAA AGCAGAAAAT
GAAAAAGAAT CTGCAGCCGG CTCATTTGTA CGTCCGGGAT TTGAAGTATA TTACAACCGC
CTTGAAAGTG ACTTTTTAAG TTACGATGCG AATTATAAAA AACTGTATAC CGGCTATCTG
GATGAATTAA AAACAGACCT GATCTTACAG CAGACACATG ATATCATGTG TGATTTTATT
AAACTTAAAC AAAAATAA
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| Protein sequence | MIGFILSRIQ LIVLLLLTFV AIPASAQTSK TEQPSCSKKT DALWVLLTKK HIAPIQFNHT
VSVEIADLLL TELDYKKIHF YESDRQNLLI QIQNLKPSSA KDLCTLIAGI SELYQTRIKE
SQAILQTLAA NELNFSENEI VTFSSSKRQF MESKEKKISR WKRNIKFLVL NNLYYAVDSA
HSTDVAAPSN FLADKNKITR TIIDKELKKI NALADPSTDF TATVENALLN AICKRFDPHT
EYYNYTAFKE FSEHLQSKVL TFGVFFGETA FGNLSIRYVA PGSTAWFSNV IQENDVVLWF
KLNQQVFDVS ALTHTEANAL LQNEKYSLLE IGLKKDNGSS ETIKLKREAI KFENNTVKSY
IIKDAKKIGY ISIPSFYSDD SNPNALGAAN ELSKEILKLK NENIEGLIID LRNNGGGSLY
EAVGMSGLFI DIGPLFYVLE RSGKATLTKD MNRGTVYDGP LCIMVNGYSA SASEIFSAAM
QDNHRALIVG EQTYGKATGQ SISQLDTTKS ISTFSATDNM GATKITEIKL YRTSGFSYQG
KGVTPDIILP YLDVLSEKEN TEPFYLKGDS IAKKAVFAFP EALPVASLNE MNNIRIKENP
QYKQLKHVSD SLHTTQDDDI IIHLTAAGFW KDMRILKAEN EKESAAGSFV RPGFEVYYNR
LESDFLSYDA NYKKLYTGYL DELKTDLILQ QTHDIMCDFI KLKQK
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