Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0613 |
Symbol | ftsH |
ID | 4184813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 714694 |
End bp | 716772 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638070618 |
Product | cell division protein, ATP-dependent metalloprotease |
Protein accession | YP_677240 |
Protein GI | 110637033 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATAC CTGAGGATAA AAAAAAGAAA AAGAGTCCAA TACCAAATCC ATCACAAAAA ACTAATTATC AGATTTTTTT AATTAGTGCA TTATTGCTGG TTGTTGTGGG TATCGCTTAT TTCAGCGGTT CCGGCGGCAT TCAGAAAACA ACCAAGCAAC GCTTTTTTGA TATGGTGCTT CAGCACGATG TTAAAAAGAT TGTTCTGGTA AACGACCGCA ATGTTGAGGT TACCATTACA GATGAAGCCT TAAAAAGCGG GCGATACGAT GAATTGCTTA AAAGAACGAA CAGTCCGTTT TCAGGTACAG CAACAGGTCC TCAGTTTCAA TTTGAAATTA CACCTTCATA TGATTTTGAA GCGAAATACG AAGAGTTCCT GAACAAAGAA AAGGTTCCCA AAGAATATCA GGTGCCCATT GAAGTGGACA GCAACCGTGC TGAAGTAACC AGTCAATTGG TGACCTTAGG ATTCTGGGTA TTGTTATTTG TAGGTACCTG GTTCCTGTTC AGAAGAGTTT CCGGCGGCGG CGCAGGCGGA CAGATCTTCA ACATAGGTAA ATCTAAAGCA GCATTATTTG ATCAGGATAA CAAAGTGAAA ATTACGTTCG CGGATGTTGC CGGTTTGGAT GAAGCAAAGG AAGAAGTAAA AGAGATCGTA GATTTCTTAC GTTTCCCGAC AAAGTTTACA AAACTTGGCG GTAAGATTCC TAAAGGCGCT TTGTTGGTAG GCCCTCCGGG TACAGGTAAA ACGTTGCTTG CAAAGGCAGT AGCAGGAGAA GCTGGCGTAC CGTTCTTCTC ACTTTCAGGG TCAGACTTTG TTGAAATGTT TGTAGGGGTA GGTGCCGCAC GTGTGCGTGA CTTATTTAAA CAGGCAAAAG AAAAGGCGCC ATGTATCATT TTCATTGATG AGATTGATGC GATTGGCCGT ATGCGTGGCA AAGGCGGAAA CATGCCGGGT TCAAACGATG AAAGAGAAAA TACATTAAAC TCTTTATTGG TTGAAATGGA TGGTTTCGGA ACAGATTCAG GTGTGATTAT CTTAGCTGCA ACAAACCGTC CGGATGTATT GGATTCAGCG TTGCTTCGTC CGGGTCGTTT TGACAGAATG ATCAGTATCG ATAAACCGGA TATCGTTGGT AGAGAGCAAA TCTTTAAAGT ACACCTGAAA CCATTGAAAT TAGGGCCTGA TGTTGATCCT AAAAAGATTG CAGCACAGAC ACCGGGTTTT GCAGGTGCAG AGATTATGAA CGTATGTAAC GAAGCTGCAT TGATTGCCGC GCGTAGAGAT AAATCTGAAA TTGATATGCA GGATTTTCAG GATGCCATTG ATCGTGTGAT CGGCGGGCTT GAAAAGAAAA CAAAGATCAT TTCACCGGAA GAGAAAAAAA TTGTTGCATA CCATGAAGCC GGACATGCTG TTGCTGGTTG GTTCCTGGAA CACGCAGATC CGTTGGTTAA AGTAAGTATC GTACCTCGCG GTGTAGCTGC ATTGGGATAC GCGCAGTACT TACCAAAAGA ACAATTCTTA TATACGGTAG AACAGCTCAC AGATGAAATG TGTATGGCAC TTGGTGGCCG TGCCGCTGAA GACATCATCT TCGGTAAAAT TTCTACCGGA GCGTTAAGTG ATTTAGAACG TATTACTAAA ATGGCATACG GAATGGTATC TATTTATGGT ATGAATGATA AGATCGGAAA TATTTCTTTC TACGATTCCA AAGCTGGTGA TTATTCATTC AACAAGCCAT ACTCTGAATC AACGGCACAG ACCATTGATG AGGAAGCACG CAACATTGTA CATGAAGCAT ACAACAGAAC GAAAAAACTG TTGCTTGAAA AGCAGCCGGA ACTTGAAATA GTTGCAAAGC AATTGCTAGA GAAAGAAATA TTATTCCAGT CGGATCTGGA GAAACTGATT GGTAAGCGCC CGTTTGAAGC TGAAACAACC TATCAGGCAT TTACAAATAA AGTAGATGCT CCTGAAACAC TGCCCGATAT CATACCCAAT CCGGCACAGC AGGAAGGGAA TTCAGGTTCT TCAACCTATT CAACAAACGA AGGAACGTAT AATAAATAA
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Protein sequence | MSIPEDKKKK KSPIPNPSQK TNYQIFLISA LLLVVVGIAY FSGSGGIQKT TKQRFFDMVL QHDVKKIVLV NDRNVEVTIT DEALKSGRYD ELLKRTNSPF SGTATGPQFQ FEITPSYDFE AKYEEFLNKE KVPKEYQVPI EVDSNRAEVT SQLVTLGFWV LLFVGTWFLF RRVSGGGAGG QIFNIGKSKA ALFDQDNKVK ITFADVAGLD EAKEEVKEIV DFLRFPTKFT KLGGKIPKGA LLVGPPGTGK TLLAKAVAGE AGVPFFSLSG SDFVEMFVGV GAARVRDLFK QAKEKAPCII FIDEIDAIGR MRGKGGNMPG SNDERENTLN SLLVEMDGFG TDSGVIILAA TNRPDVLDSA LLRPGRFDRM ISIDKPDIVG REQIFKVHLK PLKLGPDVDP KKIAAQTPGF AGAEIMNVCN EAALIAARRD KSEIDMQDFQ DAIDRVIGGL EKKTKIISPE EKKIVAYHEA GHAVAGWFLE HADPLVKVSI VPRGVAALGY AQYLPKEQFL YTVEQLTDEM CMALGGRAAE DIIFGKISTG ALSDLERITK MAYGMVSIYG MNDKIGNISF YDSKAGDYSF NKPYSESTAQ TIDEEARNIV HEAYNRTKKL LLEKQPELEI VAKQLLEKEI LFQSDLEKLI GKRPFEAETT YQAFTNKVDA PETLPDIIPN PAQQEGNSGS STYSTNEGTY NK
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