Gene CHU_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0613 
SymbolftsH 
ID4184813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp714694 
End bp716772 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content42% 
IMG OID638070618 
Productcell division protein, ATP-dependent metalloprotease 
Protein accessionYP_677240 
Protein GI110637033 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATAC CTGAGGATAA AAAAAAGAAA AAGAGTCCAA TACCAAATCC ATCACAAAAA 
ACTAATTATC AGATTTTTTT AATTAGTGCA TTATTGCTGG TTGTTGTGGG TATCGCTTAT
TTCAGCGGTT CCGGCGGCAT TCAGAAAACA ACCAAGCAAC GCTTTTTTGA TATGGTGCTT
CAGCACGATG TTAAAAAGAT TGTTCTGGTA AACGACCGCA ATGTTGAGGT TACCATTACA
GATGAAGCCT TAAAAAGCGG GCGATACGAT GAATTGCTTA AAAGAACGAA CAGTCCGTTT
TCAGGTACAG CAACAGGTCC TCAGTTTCAA TTTGAAATTA CACCTTCATA TGATTTTGAA
GCGAAATACG AAGAGTTCCT GAACAAAGAA AAGGTTCCCA AAGAATATCA GGTGCCCATT
GAAGTGGACA GCAACCGTGC TGAAGTAACC AGTCAATTGG TGACCTTAGG ATTCTGGGTA
TTGTTATTTG TAGGTACCTG GTTCCTGTTC AGAAGAGTTT CCGGCGGCGG CGCAGGCGGA
CAGATCTTCA ACATAGGTAA ATCTAAAGCA GCATTATTTG ATCAGGATAA CAAAGTGAAA
ATTACGTTCG CGGATGTTGC CGGTTTGGAT GAAGCAAAGG AAGAAGTAAA AGAGATCGTA
GATTTCTTAC GTTTCCCGAC AAAGTTTACA AAACTTGGCG GTAAGATTCC TAAAGGCGCT
TTGTTGGTAG GCCCTCCGGG TACAGGTAAA ACGTTGCTTG CAAAGGCAGT AGCAGGAGAA
GCTGGCGTAC CGTTCTTCTC ACTTTCAGGG TCAGACTTTG TTGAAATGTT TGTAGGGGTA
GGTGCCGCAC GTGTGCGTGA CTTATTTAAA CAGGCAAAAG AAAAGGCGCC ATGTATCATT
TTCATTGATG AGATTGATGC GATTGGCCGT ATGCGTGGCA AAGGCGGAAA CATGCCGGGT
TCAAACGATG AAAGAGAAAA TACATTAAAC TCTTTATTGG TTGAAATGGA TGGTTTCGGA
ACAGATTCAG GTGTGATTAT CTTAGCTGCA ACAAACCGTC CGGATGTATT GGATTCAGCG
TTGCTTCGTC CGGGTCGTTT TGACAGAATG ATCAGTATCG ATAAACCGGA TATCGTTGGT
AGAGAGCAAA TCTTTAAAGT ACACCTGAAA CCATTGAAAT TAGGGCCTGA TGTTGATCCT
AAAAAGATTG CAGCACAGAC ACCGGGTTTT GCAGGTGCAG AGATTATGAA CGTATGTAAC
GAAGCTGCAT TGATTGCCGC GCGTAGAGAT AAATCTGAAA TTGATATGCA GGATTTTCAG
GATGCCATTG ATCGTGTGAT CGGCGGGCTT GAAAAGAAAA CAAAGATCAT TTCACCGGAA
GAGAAAAAAA TTGTTGCATA CCATGAAGCC GGACATGCTG TTGCTGGTTG GTTCCTGGAA
CACGCAGATC CGTTGGTTAA AGTAAGTATC GTACCTCGCG GTGTAGCTGC ATTGGGATAC
GCGCAGTACT TACCAAAAGA ACAATTCTTA TATACGGTAG AACAGCTCAC AGATGAAATG
TGTATGGCAC TTGGTGGCCG TGCCGCTGAA GACATCATCT TCGGTAAAAT TTCTACCGGA
GCGTTAAGTG ATTTAGAACG TATTACTAAA ATGGCATACG GAATGGTATC TATTTATGGT
ATGAATGATA AGATCGGAAA TATTTCTTTC TACGATTCCA AAGCTGGTGA TTATTCATTC
AACAAGCCAT ACTCTGAATC AACGGCACAG ACCATTGATG AGGAAGCACG CAACATTGTA
CATGAAGCAT ACAACAGAAC GAAAAAACTG TTGCTTGAAA AGCAGCCGGA ACTTGAAATA
GTTGCAAAGC AATTGCTAGA GAAAGAAATA TTATTCCAGT CGGATCTGGA GAAACTGATT
GGTAAGCGCC CGTTTGAAGC TGAAACAACC TATCAGGCAT TTACAAATAA AGTAGATGCT
CCTGAAACAC TGCCCGATAT CATACCCAAT CCGGCACAGC AGGAAGGGAA TTCAGGTTCT
TCAACCTATT CAACAAACGA AGGAACGTAT AATAAATAA
 
Protein sequence
MSIPEDKKKK KSPIPNPSQK TNYQIFLISA LLLVVVGIAY FSGSGGIQKT TKQRFFDMVL 
QHDVKKIVLV NDRNVEVTIT DEALKSGRYD ELLKRTNSPF SGTATGPQFQ FEITPSYDFE
AKYEEFLNKE KVPKEYQVPI EVDSNRAEVT SQLVTLGFWV LLFVGTWFLF RRVSGGGAGG
QIFNIGKSKA ALFDQDNKVK ITFADVAGLD EAKEEVKEIV DFLRFPTKFT KLGGKIPKGA
LLVGPPGTGK TLLAKAVAGE AGVPFFSLSG SDFVEMFVGV GAARVRDLFK QAKEKAPCII
FIDEIDAIGR MRGKGGNMPG SNDERENTLN SLLVEMDGFG TDSGVIILAA TNRPDVLDSA
LLRPGRFDRM ISIDKPDIVG REQIFKVHLK PLKLGPDVDP KKIAAQTPGF AGAEIMNVCN
EAALIAARRD KSEIDMQDFQ DAIDRVIGGL EKKTKIISPE EKKIVAYHEA GHAVAGWFLE
HADPLVKVSI VPRGVAALGY AQYLPKEQFL YTVEQLTDEM CMALGGRAAE DIIFGKISTG
ALSDLERITK MAYGMVSIYG MNDKIGNISF YDSKAGDYSF NKPYSESTAQ TIDEEARNIV
HEAYNRTKKL LLEKQPELEI VAKQLLEKEI LFQSDLEKLI GKRPFEAETT YQAFTNKVDA
PETLPDIIPN PAQQEGNSGS STYSTNEGTY NK