| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0573 |
|---|
| Symbol | |
|---|
| ID | 4184059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 666875 |
|---|
| End bp | 668374 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638070578 |
|---|
| Product | sugar kinase |
|---|
| Protein accession | YP_677200 |
|---|
| Protein GI | 110636993 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.387859 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTT TAACAGCGGC ACAAATTCAT CAATTGGATC TTTACACCCA GGAAGCAGAA
CACATTACAT CACTTGCTTT GATGGAGCGG GCAGCAGAAG CATTTGTCGG ATGGTTTACC
AAACATACCT CGCTGCAAAA AGAAATATGG GTATTTTGCG GAAGAGGGAA TAATGGCGGA
GATGGTTTGG CAATTGCCTG CTTACTGATC AACCGAGGTT ACAAAGTAAA ACCGTTTATT
GTAAAATCCG GGCCGCTTAC TTCCGACTGT GCAGCAAACC TGTCGCGCCT GGAAAAAATG
GTTGCTGTTA CATCCATTGT CACAGAAGAA GATCTCGTTA AAATTCCTGC CAATATACTG
ATTATTGATG CCTTGTTAGG TTCCGGCCTG AACCGCGAAG TAACAGGTGT ATATGCAGCG
ATTATAGATA AGATCAATGC AACAGAAAAT AAAGTGTATG CGGTAGATGT ACCGTCTGGT
TTGTACAGTG ATTATCCGGC AAAGCACGCG GCAATTATTA CAGCCGATCA CACCATTACA
TTTCAGATGC CCAAGCTGAT GCTGTTTTTG TCAGACCATG AAGCATTCAC AGGTGCATGG
CACATTGTTG ATATTGGTTT AAAGATGGAA GGTGCGGCAG ATATCGTAAG CGATTATTCC
TATACAGATG CTGCAGTTAT TCATAAAATG ATACGCAAAC GGCCGGTGTT TTCACATAAA
GGCACGTTTG GAAAAGTATT GCTTATAGCA GGAAGTAAAG GAATGATGGG GGCTGCAACA
CTTGCGGCAA AATCAATTTT GCGTACCGGT GCCGGTTTGG TTTGTGTACA CATTCCCGGC
AGTGGTGTTG ATATTGTACA GACACTTATT CCTGAAGCCA TATTAAGTAT TGATCCGAAT
AAAGAAGTGG TAACAGTATT GCCGGATATA GATGGTTACA GTGCAATAGG TATCGGTGTT
GGTTTAGGGG AGCATCCGTA TACGGCAGAC GTGCTGGAAG AATTACTCGT ATCTTCTGTT
GATCCATTGG TTATTGATGC AAGCGCATTA AATATTTTAG CTTCGAATCC ACATTGGATC
ACACATATTC CGCCCAACAG TATTTTAACG CCGCACCCGA GAGAACTGGA GCGTTTGGCA
GGTATGAAAT TTCAGAACAG CTGGGAACGT TTGCATAAAG CGATTGAAAT GGCTAAAAAA
ATGCAGGTGA TCATTGTTTT GAAAGGTGCG TACACCGCGG TAGTTATGCC TACAGGCGTG
GTACACTTTA ATTCTACCGG CAATTCAGGC CTGGCTACAG CAGGCAGCGG AGATGTATTA
ACAGGTATCA TTACATCCTT TTTGGCGCAA GGCTATAGCC CGGCCGATGC AGCGCGGCTC
GGCGTATTCG CGCATGGGTA TGCGGGAGAT GCTGCCGCAG AAGTAAAATC AAAAGCCGGT
ATGATCGCAT CAGACATTAC AGAATATTTA CCCATGTTTT TTCTTGATTT TGAAGAATAG
|
|---|
| Protein sequence | MKILTAAQIH QLDLYTQEAE HITSLALMER AAEAFVGWFT KHTSLQKEIW VFCGRGNNGG
DGLAIACLLI NRGYKVKPFI VKSGPLTSDC AANLSRLEKM VAVTSIVTEE DLVKIPANIL
IIDALLGSGL NREVTGVYAA IIDKINATEN KVYAVDVPSG LYSDYPAKHA AIITADHTIT
FQMPKLMLFL SDHEAFTGAW HIVDIGLKME GAADIVSDYS YTDAAVIHKM IRKRPVFSHK
GTFGKVLLIA GSKGMMGAAT LAAKSILRTG AGLVCVHIPG SGVDIVQTLI PEAILSIDPN
KEVVTVLPDI DGYSAIGIGV GLGEHPYTAD VLEELLVSSV DPLVIDASAL NILASNPHWI
THIPPNSILT PHPRELERLA GMKFQNSWER LHKAIEMAKK MQVIIVLKGA YTAVVMPTGV
VHFNSTGNSG LATAGSGDVL TGIITSFLAQ GYSPADAARL GVFAHGYAGD AAAEVKSKAG
MIASDITEYL PMFFLDFEE
|
|---|
| |