Gene CHU_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0526 
Symbol 
ID4185156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp603176 
End bp603883 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content41% 
IMG OID638070531 
Productcarbonic anhydrase 
Protein accessionYP_677153 
Protein GI110636946 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00212922 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGCACCATT CGATTTCATT TCCTATTTTT CAATATTCAT TATACACCAT ACGCTATAAA 
ACAATGAGTC AGCAACCATT AATCGAACGT GTTCTTTCTG CGGAAGAACA GAAACAGTTA
ACACCCGATG AAGTAATCGC GAGTTTAAAA GAAGGGAATA AGCGTTTTTG TTCCGGCAGC
TTAACCATGC GCGATCACTC CAAACAGATC AGAGATGCAG TAAGCGGTCA GTTCCCGAAA
GCTATTGTAT TATCATGCGT AGATTCACGT GTACCGATCG AAGATGTATT TGATAAAGGA
ATCGGCGATA TGTTTGTTGC CCGTGTAGCC GGCAATATCG TGAATGAAGA TATTCTTGGT
TCTATGGAGT TCAGCTGTAA AGTATCCGGT GCAAAATTAG TGCTTGTGCT TGGTCATGAA
TATTGCGGCG CGATTAAAGG TGCTATTGAT AATGTGCAGC TGGGCAATCT TACAGCACTG
CTTCAGAAAA TACGGCCGGC TGTTGACAGA TGCTGCGATT TTCAAGGTGA CCAAACATCT
AAAAATTCAC AGTTTGTTGA TCTGGTTGTT CGTGAAAATG TAAAAGTAAC GGTTGCAAAT
ATTCGTCAGC AAAGCCCTGT TTTACGGGAG ATGGAAGATG CCGGTGAAAT AAAAATCGTT
GGCGCCTATT ACGATATGGA TAATGGTGAA GTGTCGTTTT ACGAATAA
 
Protein sequence
MHHSISFPIF QYSLYTIRYK TMSQQPLIER VLSAEEQKQL TPDEVIASLK EGNKRFCSGS 
LTMRDHSKQI RDAVSGQFPK AIVLSCVDSR VPIEDVFDKG IGDMFVARVA GNIVNEDILG
SMEFSCKVSG AKLVLVLGHE YCGAIKGAID NVQLGNLTAL LQKIRPAVDR CCDFQGDQTS
KNSQFVDLVV RENVKVTVAN IRQQSPVLRE MEDAGEIKIV GAYYDMDNGE VSFYE