| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0506 |
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| Symbol | rsaD |
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| ID | 4186254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 584777 |
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| End bp | 586615 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070512 |
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| Product | ABC transporter, ATP-binding protein/permease |
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| Protein accession | YP_677134 |
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| Protein GI | 110636927 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.740474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT TTAACCGAAT ACTCGCGTTT GCCAAGCCTT ATCCAAGGTT TGCCGTTCCC
TATTTTATTT TCGCAATGGC TTCCACCCTC TTTGGCCTGG TGAACTTTGC ATTCTTAATG
CCCATTCTGG ACTTATTATT CAATGCAACA AAATCCCTGG AAAATTTAAC GAAACCGGTA
CCAGGTTTTA ATATTGATTA TTTCAAAGGT ATTCTGGATT ATTACACCGC ATCCTTGATT
CAGGAATATG GCAAAAGTAC AACGTTGATA TTCATTGCGC TTTTTCTGAT CAGTACAAAT
TTTCTTACCA ACATCTTTAA ATATTTTTCG CAGCTCATCA ATACCCGTTT GCGTGCAACG
GTTATTTATA ACATGCGCGA ACGTATGTTT GATAAGGTAG TGAAGCTGGA TGTAGGTTAT
TTTACCAATC AGCGCAAAGG CGATCTGATG TCGCGTATGA CAAATGATTT AGGTGAAATA
GAAAACTCCG TGATCGGTGC CTTACAGGTA TTTTTCAGAG ATCCGTTCAA CCTGGTTATT
TATTTTATTA CGCTGTTAAT GATCCAGTGG GAATTAATGC TTTTTACGCT GCTGATCCTG
CCAATAGCAG GTTTGGGCGT TTCCATCATT GGTAAAAAAT TAAAAAAAGA ATCCGAAGAA
AGTCAACGCT CCGTTGGGCA TATCCTGTCG CTGATCGATG AATCCATTAG TGGCATTCGT
ATCATCAAAG GATTTATTGC CGAAAAATTT GTCATTAATC GGTTTAATGA TCAGGGGAAA
AAATATGCAG ATCTGACAAA CTCCATGGGT AATAAAAGAG AACTTGCTTC TCCGTTAACA
GAATTCATGG GCGTTACCAT CGTTGCGATC ATCTTATATA TCGGAGGCAA TCTTGTATTC
TCCGGAAAAA TGGAAGCAAG TACCTTTTTC TTATTTATTA TCTGCTTCTA CAAAATACTT
GAACCGGTAA AAAGTCTTGC CTCTTCCATT ACATCCATCC AGCGCGGCAT TGCAGCCGGC
GACCGGATTT TTGACATCCT GGATCATCCG GTATCTATTG AGGATACTCC ATCGGCAAAA
ACACTCTCTG CATTCACTAC GGGTGTAAGC CTGAAGAACA TTGGCTTTAA ATATGAAGAA
CATGAAGTAT TGAAACATAT TTCCATTGAC ATACCAAAAG GAAAATTGAT TGCACTTGTG
GGACCAAGCG GCGGCGGTAA ATCTACCTTA GTCGACCTCA TTCCGAGATT CTATGACCCG
GCAACAGGCA GCGTAGAAAT TGACGGTGTC AATATCAAAG ACTATACACT GAATTCCTTA
CGTTCGTACA TTGGTATTGT AACGCAGGAA TCGATTTTAT TTAACGATAC TATTTTTAAC
AACATTGCTT TTGGTCTGCC GAACATTACA CAGGAAGATG TTGAACGCGC AGCACGTATT
GCCAATGCGC ATGAATTTAT CATCCGTACC GAAAAGGGAT ATCAGACTTC TATCGGCGAG
CGCGGTTCTA AATTATCAGG CGGACAGCGT CAGCGTTTAA GCATTGCCCG TGCGGTATTA
AAAAATCCGG ACATCTTAAT TTTAGATGAA GCAACATCTG CCCTTGATAA TGAATCTGAA
AAACTGGTAC AGGAAGCATT AAATTATTTA ATGAAAGACC GTACGTCCAT TGTTATTGCA
CACCGTTTAA GCACCATCCG TCACGCCGAT ATGATCCTTG TACTGGACAA AGGCCAGATC
AAAGAACAAG GCACCCACGA ACAATTGCTG GCGCAGGAAG GCATCTATTA CAAATTACAC
CAGCACGCCA GCGAAACCGG CGGCATGATC ATCGAATAA
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| Protein sequence | MKTFNRILAF AKPYPRFAVP YFIFAMASTL FGLVNFAFLM PILDLLFNAT KSLENLTKPV
PGFNIDYFKG ILDYYTASLI QEYGKSTTLI FIALFLISTN FLTNIFKYFS QLINTRLRAT
VIYNMRERMF DKVVKLDVGY FTNQRKGDLM SRMTNDLGEI ENSVIGALQV FFRDPFNLVI
YFITLLMIQW ELMLFTLLIL PIAGLGVSII GKKLKKESEE SQRSVGHILS LIDESISGIR
IIKGFIAEKF VINRFNDQGK KYADLTNSMG NKRELASPLT EFMGVTIVAI ILYIGGNLVF
SGKMEASTFF LFIICFYKIL EPVKSLASSI TSIQRGIAAG DRIFDILDHP VSIEDTPSAK
TLSAFTTGVS LKNIGFKYEE HEVLKHISID IPKGKLIALV GPSGGGKSTL VDLIPRFYDP
ATGSVEIDGV NIKDYTLNSL RSYIGIVTQE SILFNDTIFN NIAFGLPNIT QEDVERAARI
ANAHEFIIRT EKGYQTSIGE RGSKLSGGQR QRLSIARAVL KNPDILILDE ATSALDNESE
KLVQEALNYL MKDRTSIVIA HRLSTIRHAD MILVLDKGQI KEQGTHEQLL AQEGIYYKLH
QHASETGGMI IE
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