| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0494 |
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| Symbol | rfbD |
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| ID | 4186243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 575093 |
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| End bp | 575989 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638070501 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_677123 |
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| Protein GI | 110636916 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.346863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATAT TAATCACCGG CAGTAACGGT TTACTTGGAC AGAAGCTGGT TTCATTACTA
TACCTGAAAC CGGAAATCAC ATTAATCGCT ACGGCACGTG GCGCTAACCG CGATGAGATC
TACGAAGATT ATATCTACGA ATCCATGGAT ATAACTTCAG AAGAAAATGT GTTAAAGGTA
TTCCGGAAAC ATAAGCCGGA TGCAGTTATT CATACGGCAG CGATGACACA CGTAGACCAA
TGTGAGCTGA ACAAAGAAGC TTGTGTGGAT CAGAACATCA CCTCAGTAAA ACATATTGTA
AAAGCATGTA AAGAGGTTGG CGCATTTCTA TTGCATGTAT CTACCGATTT TATTTTTGAC
GGAACACGCG GGCCGCTTAC CGAAGAAGAA ATACCAAACC CGGTCAACTA CTATGGCTGG
ACCAAGTGGG AAGCAGAGAA AGCGGTTGAG AACTCCGGAC TGAAATGGGC GATTGCACGT
ACCGTATTGG TGTTTGGTGT GGTGCAGGAT ATGAGCCGCA GCAACATTGT GTTGTGGGTG
AAAAATAATC TCGAACAGAA AAAAGAGATC AACGTTGTAA ACGATCAGTG GCGCACACCA
ACATTAGCTG AGGATCTGGC GATGGGCTGC TGGCTGATTG TTAAAAATCA GGCGGAAGGC
ATCTTTAATA TTTCCGGCGA AGAAATGCTA AGCCCGTACG AACTTGCACA TAAAGTTGCC
GATGTATGGA AGCTGGATAA AGGATTGATC AAACAAGCCG ATTCATCCAC CTTTACACAA
CCTGCTCTGC GTCCGCCCAA AACAGGTTTT ATCATCGACA AAGCAAAAAA ACAATTGGGC
TACAAACCAC ACACATTAGA AGAAGGACTG GACCTGCTGA AAGAACAACT AACGTAG
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| Protein sequence | MKILITGSNG LLGQKLVSLL YLKPEITLIA TARGANRDEI YEDYIYESMD ITSEENVLKV
FRKHKPDAVI HTAAMTHVDQ CELNKEACVD QNITSVKHIV KACKEVGAFL LHVSTDFIFD
GTRGPLTEEE IPNPVNYYGW TKWEAEKAVE NSGLKWAIAR TVLVFGVVQD MSRSNIVLWV
KNNLEQKKEI NVVNDQWRTP TLAEDLAMGC WLIVKNQAEG IFNISGEEML SPYELAHKVA
DVWKLDKGLI KQADSSTFTQ PALRPPKTGF IIDKAKKQLG YKPHTLEEGL DLLKEQLT
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