Gene CHU_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0334 
Symbol 
ID4185516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp400493 
End bp401668 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content41% 
IMG OID638070342 
Productsensor histidine kinase 
Protein accessionYP_676964 
Protein GI110636757 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATAT ATAAATTAAA CTTTCGGATT AAATGGATCA TTGTTTTATT GGGAATAATT 
GTTATTGCTG GTTCTCTGGT CTATACCGAT TATCTGGCAA AACGCCTGGT AGAACGCGAA
CGGAAACTTA TTGATTTGTA TGCCAAAGCA TTAGAGACCG CTGCTACACA AGAGCCCGAT
GCAAACATGG CTTTTCTCTC CGAGAAGATT ATTAATGCCA ATACATCCGT TCCGGTTATT
CTAACGGATG AAACCGGCGA ACCGCTGAGT TCAAAAAATA TTGTTTTGCC GGGTAATGTT
TCGAAAGAAA AGGAAGATCT TTTTTTGAAA CAGCAGATCC TTCTTATGGC AGCACAACAT
GAGCCCATCA GCATTGAGTT TTACGGCATG AAAAATTATG TGTACTACAA AGATTCAGAG
ATTCTTACCA TGCTGCGCTA CTACCCGTAT ATTCAGCTCA CGGCTATTGT TTTTTTAAGC
CTGGCGGGCT ATGTAGCATT CAATTACAGT AAAAAAGCCG AACAAAGTAA AGTTTGGGTA
GGGCTTGCAA AAGAAACCGC GCACCAGTTG GGTACTCCGC TGTCTTCGCT GTTCGCCATC
CGTGACTATT TCAAGGAAAT AGAGCCTTTC AAAAGCGATC CCATGACAGA AGAACTGGCA
AAGGATGTAG ACCGCTTGAA TGTGATCACC GCACGTTTCT CTCAGATTGG TCTGGAAGGA
AAGCTGACAC CGGAAAATGT TGCCAATGTG ATTGAAGAAA ATATCGATTA TCTGAAATCA
AGAACATCGT CGTATGTATC GTATTCGATG GAAGATTTTA CAGACGGGGC TACAGCTGTG
ATGAACATTT CGCTGATGGG CTGGGTGATT GAGAACATCT GTAAAAACGC CATCGATGCG
ATGGATGGCC GCGGTTCCAT TCATATTTCG ATTTTAACTG TTAAAAATAC CATCTGCATT
GATATAAAAG ATTCGGGGAA AGGTATTCCG AATAATAAAA TTAAAACAAT TTTTAAACCT
GGTTTTACTA CTAAGAAACG CGGCTGGGGC CTGGGTTTAA CACTGGTGAA ACGTATTGTA
GAAGAATATC ACGGAGGGAA AGTATACGTG CTCCAAAGCG GCATAGATAA AGGAACAACG
TTCAGGATTG AATTGAAAGG AGTACAGAGT ACTTAG
 
Protein sequence
MDIYKLNFRI KWIIVLLGII VIAGSLVYTD YLAKRLVERE RKLIDLYAKA LETAATQEPD 
ANMAFLSEKI INANTSVPVI LTDETGEPLS SKNIVLPGNV SKEKEDLFLK QQILLMAAQH
EPISIEFYGM KNYVYYKDSE ILTMLRYYPY IQLTAIVFLS LAGYVAFNYS KKAEQSKVWV
GLAKETAHQL GTPLSSLFAI RDYFKEIEPF KSDPMTEELA KDVDRLNVIT ARFSQIGLEG
KLTPENVANV IEENIDYLKS RTSSYVSYSM EDFTDGATAV MNISLMGWVI ENICKNAIDA
MDGRGSIHIS ILTVKNTICI DIKDSGKGIP NNKIKTIFKP GFTTKKRGWG LGLTLVKRIV
EEYHGGKVYV LQSGIDKGTT FRIELKGVQS T