Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0334 |
Symbol | |
ID | 4185516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 400493 |
End bp | 401668 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638070342 |
Product | sensor histidine kinase |
Protein accession | YP_676964 |
Protein GI | 110636757 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATAT ATAAATTAAA CTTTCGGATT AAATGGATCA TTGTTTTATT GGGAATAATT GTTATTGCTG GTTCTCTGGT CTATACCGAT TATCTGGCAA AACGCCTGGT AGAACGCGAA CGGAAACTTA TTGATTTGTA TGCCAAAGCA TTAGAGACCG CTGCTACACA AGAGCCCGAT GCAAACATGG CTTTTCTCTC CGAGAAGATT ATTAATGCCA ATACATCCGT TCCGGTTATT CTAACGGATG AAACCGGCGA ACCGCTGAGT TCAAAAAATA TTGTTTTGCC GGGTAATGTT TCGAAAGAAA AGGAAGATCT TTTTTTGAAA CAGCAGATCC TTCTTATGGC AGCACAACAT GAGCCCATCA GCATTGAGTT TTACGGCATG AAAAATTATG TGTACTACAA AGATTCAGAG ATTCTTACCA TGCTGCGCTA CTACCCGTAT ATTCAGCTCA CGGCTATTGT TTTTTTAAGC CTGGCGGGCT ATGTAGCATT CAATTACAGT AAAAAAGCCG AACAAAGTAA AGTTTGGGTA GGGCTTGCAA AAGAAACCGC GCACCAGTTG GGTACTCCGC TGTCTTCGCT GTTCGCCATC CGTGACTATT TCAAGGAAAT AGAGCCTTTC AAAAGCGATC CCATGACAGA AGAACTGGCA AAGGATGTAG ACCGCTTGAA TGTGATCACC GCACGTTTCT CTCAGATTGG TCTGGAAGGA AAGCTGACAC CGGAAAATGT TGCCAATGTG ATTGAAGAAA ATATCGATTA TCTGAAATCA AGAACATCGT CGTATGTATC GTATTCGATG GAAGATTTTA CAGACGGGGC TACAGCTGTG ATGAACATTT CGCTGATGGG CTGGGTGATT GAGAACATCT GTAAAAACGC CATCGATGCG ATGGATGGCC GCGGTTCCAT TCATATTTCG ATTTTAACTG TTAAAAATAC CATCTGCATT GATATAAAAG ATTCGGGGAA AGGTATTCCG AATAATAAAA TTAAAACAAT TTTTAAACCT GGTTTTACTA CTAAGAAACG CGGCTGGGGC CTGGGTTTAA CACTGGTGAA ACGTATTGTA GAAGAATATC ACGGAGGGAA AGTATACGTG CTCCAAAGCG GCATAGATAA AGGAACAACG TTCAGGATTG AATTGAAAGG AGTACAGAGT ACTTAG
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Protein sequence | MDIYKLNFRI KWIIVLLGII VIAGSLVYTD YLAKRLVERE RKLIDLYAKA LETAATQEPD ANMAFLSEKI INANTSVPVI LTDETGEPLS SKNIVLPGNV SKEKEDLFLK QQILLMAAQH EPISIEFYGM KNYVYYKDSE ILTMLRYYPY IQLTAIVFLS LAGYVAFNYS KKAEQSKVWV GLAKETAHQL GTPLSSLFAI RDYFKEIEPF KSDPMTEELA KDVDRLNVIT ARFSQIGLEG KLTPENVANV IEENIDYLKS RTSSYVSYSM EDFTDGATAV MNISLMGWVI ENICKNAIDA MDGRGSIHIS ILTVKNTICI DIKDSGKGIP NNKIKTIFKP GFTTKKRGWG LGLTLVKRIV EEYHGGKVYV LQSGIDKGTT FRIELKGVQS T
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