Gene CHU_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0316 
Symbolppx 
ID4185499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp381207 
End bp382151 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content43% 
IMG OID638070325 
Productexopolyphosphatase 
Protein accessionYP_676947 
Protein GI110636740 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAC GCATTGGAGT CATTGATATG GGTACAAATA CGTTTCATTT ACTTATCACA 
GATATTGTAA ATGACAGGCC ACATACGTTA GTGAATGAGA AGTCTGCTGT AGGTCTGGGG
AAAGGCGGTA TTACAAAAGG ATTTATTACC GAAGAAGCCA TGGACCGTGC ATTGGATACG
CTAAAAAAAT TCCGTGTTAT TTTAGATGAG CATGCGGTCG TGCATGTTAT TGCCACCGGT
ACAAGTGCCG TTAGAAGCGG CTCTAACAAA CAGGTGCTGA TAGATCGTAT AAAGAAAGAA
GTAAATATTG ATGTGGAAGT GATTGATGGT GCGCGCGAAG CTGAATTGAT TTTCAGAGGT
GTGCAGCAGG CAGTACCTAT GGAAGATCAC ATATCGCTGG CCATGGATAT AGGCGGTGGC
AGTGTAGAAT TTATCATTGG GAATAAAAAT GAAATTTTGT GGAAACAAAG TTTTGAGATC
GGTGGACAGC GGCTGATCGA CCGCTTTCAT GTACACGATC CCATGCGGGA AGACGACCGT
GTAATGATGC ACAACTATTT TGATGAGGTA TTGGTGCCAC TGGAGAAGGC TATAAACACC
TGGAGACCCA CACAATTGAT TGGTTGTTCA GGTACGTTTG ATACACTTGC TGAAATGAAT
ATTCAGCACC ACAGGGAAAA AATTGCGCTT GAAAAACAAA CAAGCTACCT GTTATCTTTA
CCCGATTTTA ACCGGTTACG CAAACAGCTT GTCGCAAGTA CCCGTAGAGA ACGGCTTGCG
ATTGCCGGCA TGATTGAATT ACGTGCCGAT ATGGTAGTTG TTGCCATCTG CCTGATTGAA
CATGTATTGA AGCTCGTATC TACCAATGCC ATTACTGTTT CTACGTATTC GCTGAAAGAA
GGCGTCTTGT ATACCATGCT GGATGGTGTT AAGGTTGGGA GTTGA
 
Protein sequence
MSQRIGVIDM GTNTFHLLIT DIVNDRPHTL VNEKSAVGLG KGGITKGFIT EEAMDRALDT 
LKKFRVILDE HAVVHVIATG TSAVRSGSNK QVLIDRIKKE VNIDVEVIDG AREAELIFRG
VQQAVPMEDH ISLAMDIGGG SVEFIIGNKN EILWKQSFEI GGQRLIDRFH VHDPMREDDR
VMMHNYFDEV LVPLEKAINT WRPTQLIGCS GTFDTLAEMN IQHHREKIAL EKQTSYLLSL
PDFNRLRKQL VASTRRERLA IAGMIELRAD MVVVAICLIE HVLKLVSTNA ITVSTYSLKE
GVLYTMLDGV KVGS