Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0292 |
Symbol | |
ID | 4185768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 351163 |
End bp | 352707 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638070301 |
Product | hypothetical protein |
Protein accession | YP_676923 |
Protein GI | 110636716 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCG ATGCCCTTCC AGCATTTGAT ATTATTGAAG TACGTTTTAA AAACGGGAGA AAAGAATTTT TCAGGAATAC AAAATCGTTA GAGTTATATG CCGGGGACCC TATTGTTGTA GAAGTACAAT CCGGGCACCA TATCGGCTAT GTTTCTATGC AGGGTGAAAT TGTACGCCTG CAAATGAAAA AGAAGAATGT GCTGAATAAC GATGATATTA AGGCCATTTA CCGTAAAGCA ACGCAAAAAG ATCTGGAGAA ATTTGAACAG GCGAAAAACC GCGAAGCAAG TTCTTTATAC CGTACGCGTG AAATAATTGT TGATCAGAAA TTAGGTATGA AATTATCTGA TGTGGAATTT CAGGCAGACA ATACAAAAGT TACTTTTTAT TATTCTGCGG AAGACCGTGT TGATTTCCGG GAGCTGATTA AAATGCTGGC CGGTGAATTC AAGGTGCGTA TTGAAATGAA ACAGATCAGC CTGCGCCATG AAGCAGCTCG TTTAGGCGGC ATCGGTTCGT GCGGACGGGA ACTTTGCTGC TCAACCTGGC TGACAGATTT TAAAAACGTG AATACATCTG CTGCGCGTTA TCAGAATTTA TCGTTAAACC CATCCAAGCT TTCAGGCCAG TGCGGCCGCC TGAAGTGCTG TTTAAACTAT GAGCTGGATA CGTATCTGAA TGCATTAAAA GGAATTCCTG AAGTTGAGGT TCCGCTTAAA ACCGCGATGG GGAATGCAAC GCTTCAGAAA ACAGACATCT TCAAACGTAT TATGTGGTTC GGTTTCCAGG ACGAGACTAC CTGGTTCCCG TTGCAGGTTG AACGTGTTAT TGAAATTATA GAAATGAATA AGGCAGGCAA AACACCTGCA ACGTTAGAAT CGAACGAGGA GATAATCAAA GACGATCGTA TTATGATCCG TGAGAAAGAA GAACTTTCAC GCTTTGATGA TAAATTCAAA TCGAAAAATA AAAAACGTAA AAAGAAACGT TCCGGTGACG ATGCTTCAGA CCGTACTGAA CGCGCACAGC GTCCTGCGGT GAACATTCAG CGTGTGAGCC AGAATCAGCA GGTGCCAAGA AGTGAAAAGC CGCAACAAGC TGCTGAACCA CGCAACGAAA ATCAAAACAA TTCAAACAGA CCGCAACGTA TTTCTCCGAA TCAGCAGGAG GTGCGGAAAG AAGCTCCGCG TAACGAAAAC AAAAACAGGG AAGGCAGTAA ACAGCCCAAC AATAATTCTA ACCGTCCGCA GCGCGTTAAC CAGCAAAACA CACCGCAGTC AAATCAGCAG CAGCCGAATC CAAAAAAGCA GCAGCCGAAC CAGCCTGACC GTGACCGCAC GCCAAGACAA GGGAACCAAC AGCAGCATAC AAATCCCAAA CCACAGGGCC AACAACATAA AGAACCGAAG AAGCCTCAGC AGGACAATCA ATCAACGGGC GGAAATAAGC ACCAATTGAT TAAAAAACCT TCGGGCAACT TCCCTCCAAG ACAGAATAAT CAAAACCCGG GAGAAGAAAG TTCACCAAAC AACTCCAATA ACTAA
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Protein sequence | MELDALPAFD IIEVRFKNGR KEFFRNTKSL ELYAGDPIVV EVQSGHHIGY VSMQGEIVRL QMKKKNVLNN DDIKAIYRKA TQKDLEKFEQ AKNREASSLY RTREIIVDQK LGMKLSDVEF QADNTKVTFY YSAEDRVDFR ELIKMLAGEF KVRIEMKQIS LRHEAARLGG IGSCGRELCC STWLTDFKNV NTSAARYQNL SLNPSKLSGQ CGRLKCCLNY ELDTYLNALK GIPEVEVPLK TAMGNATLQK TDIFKRIMWF GFQDETTWFP LQVERVIEII EMNKAGKTPA TLESNEEIIK DDRIMIREKE ELSRFDDKFK SKNKKRKKKR SGDDASDRTE RAQRPAVNIQ RVSQNQQVPR SEKPQQAAEP RNENQNNSNR PQRISPNQQE VRKEAPRNEN KNREGSKQPN NNSNRPQRVN QQNTPQSNQQ QPNPKKQQPN QPDRDRTPRQ GNQQQHTNPK PQGQQHKEPK KPQQDNQSTG GNKHQLIKKP SGNFPPRQNN QNPGEESSPN NSNN
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