| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0253 |
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| Symbol | |
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| ID | 4185004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 303628 |
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| End bp | 306285 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638070263 |
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| Product | hypothetical protein |
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| Protein accession | YP_676885 |
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| Protein GI | 110636678 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.274245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAG CGATACTACT GCTTGGCGTA GTCCTTGGAT CTTTCTTCCA GTGGGCAGCT
GCACAAACTT CCGTAATCAA CGGATTAACC GTAATAGTAA ACTATTCCGA TTATTCACTT
GGCATTCCAA CAGATTCAAT TGCTATGCTG ATGAATCAGC CTGGCTTTAA TTCCTGGAAT
TGCCATGGTT CAGTGAAAGA TTTTTACTAT GTTCAAAGCA ACAGTAAAGT AAGCCTTAAC
AGTACGGTAA TTGAAGTATC CTTGCCTCAG AGTTTCCATT ACTATCACGA TGATGATGCT
ACCAGTGGAA ACTTTATACC ACACATTGCA AGCCAGATTG CAGCTAAATA TCCGAATGGG
TTTCAGAATT TAAGTCTGCA TCCGGAAACA GCAAGACTGC ATCATTTTAA TATCATCAGC
CGCGGCTCAA GAGGCATCGG TGTTGCATAT GGCACGGATG GTTCGTTTGT AAAAAACAAC
AATCAGCAGC TGCAGATCGG CGGCCTGAAC GTGTATAATG TTACCGGTAT AGAAAAACCA
ACCGTAAATA CTATTTGTCA TGAAGTTGGC CACAGTGTAT TTGGCTGGAC AGATTATTAC
AGAACGAATG TAAGTAACCT TGGAGACTTC TGTGTAATGG CCAGTGCCGG AACAGAAACT
CCAATGCCTG TCAATCCTGC GTTGCGTTAC ATCAAAGGCT GGACAAACGA AAACAACGCA
ATTTCAGCTA CAACAACGCA GACGTATACC GTTACTTCAA ACAGTTACAA TCAGGTTTTT
AAATACACAA ACCCAAACAA TCCAAAAGAA TATTTAATTA TTGCCGCGCA CATGTATGGC
GGGTATTACC AGGCAGCTAA AGGCCCGGAT CAGGGCTTGG GTATTTATTA TGTGGATGAA
GATGGCGGTA TTGATGGCAA CACAACTACA CCAAACGGTT ATCCGCCGCT TGTGCATCTG
ATTCAGGCTG ATGGCCAGGA TGAATTGCAA ACAGAAGGAA GCCCGGATGT ACGGGGTGAT
TCATATGATC TGTTCGATAA TAATTCAAGT GTCTTTTCAT CTTTCACACA TCCATTCAGA
TGGAAAAACG GAAATGAAAC AGGTCTTACA ATTACAAACA TCAGTGCTGT GGGACCAACC
ATGCAGTTTA CTGTTCAGGC AAGAAATCCT AATACGGTCA GCGTACAGAC CAATGCTGTA
AACGGCGGCA GTATCTATCC AAGCGGTTTA GTTGAATACA GCATCTACCA GACAATAAAT
TTTGCCATTA CACCAAACGT AGGTTATGTT ATCGATCAGG TATATTTTGA TGGTGCTCCG
ATTGGTACGC CGCAGCACTA TGGGTTTACC GGAATGAGCG GTGCACATGC ACTGCGTGCA
ACATTCAAAC GTGATACAAC TATTGATGCA ATACCTGCTC CCTGGGCTAA ACAGGAAATC
GGAACAACAA GAAGACCAGG CGTTGCCGGA TACAGAAACG GCGTATTCGG AATTGAATCC
GGCAGCTATG ATATCTGGAA CGAAAGCGAT GGTTTGAATT ACGTGTATCA ATCGTTACAG
GGAGACGGGC AGATTGTAGC ACACATTAAA GATATGAACA AAGCGGCTGG CTGGTCGAAA
GCAGGTATCA TGATGCGTGA GACATTGAGC GCAGATTCAA AACATCTGAT GATTGTGCAC
ACACCACAGA ATGCAGTTGC AACTCAATTA AGATCCGCAA CCGGTGGTTC ATCTGTTAAC
AATCCGGATG ACATAAAAAA TCTGCATTTC TATAATGCAT ACAAATGGTT AAAAATAACA
CGCGAAGGAA ACAGTTTCAA AAGTTACTGT TCAAATGATA CTATTAACTG GGTATACGTT
GGTGGTTCTA CCATCAATAT GGGTTCTTCT ATTTATGTGG GTTTATGTGC AGGTGTCGGC
AGTGATCAGT TAAATACGAT TGTAACATTT GACTATGTAA AAGTTACAAA ATCTGCTGTG
GCAGAAAATT TATTTACACG CTTTGGAATA CCACGTAACG CGCCTCTGCC CACAACAATA
AAAAACTTCA AGTATGTATA TTCTGTTGGC TCAGGCGGAC CGAATTTAAG CAACGTATCG
CTTGCTGTTA TCAACTGGGA TCTTCCTAAC AATGGTCTGT GGCAGTTCTC CTTACAGACA
AATAATGGTG CACCACGCTG GTATACAAAT ATCCCTTCAT ACGGATTTAA TAGTTTTGGT
GCTTCATCAC CTAAGATATA CATTGATGGT TCAATGGACT TCCCTGGTTT CAGCGGTTTC
TTCTTTGCAA ATACATATAA CACGAATGAT CTGGTATTGG TAAATCAATC GGGTGCTTAT
GCTGTGATCT TTACAAACAC ACCACCCGCT GCAAGAACTG CTTCGGATGA TTTTACTTCT
ACAACATCCA CATCGTCTGT AGAAATTTCT TCTGTTGTTT CTGCACCAAA TCCGTTTACG
GAACAAACAA CTGTTTCTAT TCCGGATGCA TTTGGCGAAG CAACAATTAC CGTATTGAAC
GCAAGCGGTA TTGTTGTTGA AACAAAAATA GCAAGCAAAT CATTTACGTT AGGCGATCAG
TATGCTGCAG GTTTGTACCT GGTGAAAATT GCATCGGACT ATAAAACAGA AACGATCCAA
ATCATTAAAG CGCACTAA
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| Protein sequence | MKKAILLLGV VLGSFFQWAA AQTSVINGLT VIVNYSDYSL GIPTDSIAML MNQPGFNSWN
CHGSVKDFYY VQSNSKVSLN STVIEVSLPQ SFHYYHDDDA TSGNFIPHIA SQIAAKYPNG
FQNLSLHPET ARLHHFNIIS RGSRGIGVAY GTDGSFVKNN NQQLQIGGLN VYNVTGIEKP
TVNTICHEVG HSVFGWTDYY RTNVSNLGDF CVMASAGTET PMPVNPALRY IKGWTNENNA
ISATTTQTYT VTSNSYNQVF KYTNPNNPKE YLIIAAHMYG GYYQAAKGPD QGLGIYYVDE
DGGIDGNTTT PNGYPPLVHL IQADGQDELQ TEGSPDVRGD SYDLFDNNSS VFSSFTHPFR
WKNGNETGLT ITNISAVGPT MQFTVQARNP NTVSVQTNAV NGGSIYPSGL VEYSIYQTIN
FAITPNVGYV IDQVYFDGAP IGTPQHYGFT GMSGAHALRA TFKRDTTIDA IPAPWAKQEI
GTTRRPGVAG YRNGVFGIES GSYDIWNESD GLNYVYQSLQ GDGQIVAHIK DMNKAAGWSK
AGIMMRETLS ADSKHLMIVH TPQNAVATQL RSATGGSSVN NPDDIKNLHF YNAYKWLKIT
REGNSFKSYC SNDTINWVYV GGSTINMGSS IYVGLCAGVG SDQLNTIVTF DYVKVTKSAV
AENLFTRFGI PRNAPLPTTI KNFKYVYSVG SGGPNLSNVS LAVINWDLPN NGLWQFSLQT
NNGAPRWYTN IPSYGFNSFG ASSPKIYIDG SMDFPGFSGF FFANTYNTND LVLVNQSGAY
AVIFTNTPPA ARTASDDFTS TTSTSSVEIS SVVSAPNPFT EQTTVSIPDA FGEATITVLN
ASGIVVETKI ASKSFTLGDQ YAAGLYLVKI ASDYKTETIQ IIKAH
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