| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0228 |
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| Symbol | |
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| ID | 4185529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 277701 |
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| End bp | 278954 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638070238 |
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| Product | hypothetical protein |
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| Protein accession | YP_676860 |
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| Protein GI | 110636653 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.008996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCAGACA GCATCCAGGA AAAACTTCAG ATACTTGCAG ATGCAGCGAA ATACGACGTA
TCCTGCTCTT CAAGTGGCAG CAAACGCAAA AATCACAACA AAGGCTTAGG CGATACGGGC
AATGGTATCT GCCATACATA TACCGAAGAC GGACGCTGCG TATCGTTGTT AAAGATCCTG
CTTACAAATG TATGTATCTA CGATTGTGCT TATTGTGTTA CCCGCAAAAG CAACGATATA
CAGCGCGCAG CTTTTACCGT GCAGGAAGTC GTTGATCTCA CCATCAATTT TTACCGGCGC
AATTATATTG AAGGATTATT TTTAAGTTCA GGTATTTTTA AAAATGCCGA TTATACCATG
GAACGCCTGG TACTGATCGC AAAGAAACTA CGCACCGAAC ATAGGTTCAA CGGATACATT
CACCTTAAAT CCATTCCCGG GGCCAGCGAC GAAATCATGC ATGAAGCAGG CCTCTACGCG
GACCGCTTAA GCATTAACAT TGAGATCCCT ACTGAAACGG GCTTGAAATT ACTGGCTCCC
GACAAGAACA GAACCGATAT GATTCAGCCG ATGACGTATC TGAAAAATGA AATCATCCTG
AAGCAAGATG AAAAAAAACT ATTTAAGAAA GCGCCTGTGT TTGCTCCTGC CGGACAAAGT
ACGCAAATGA TTATCGGTGC TGCGAAAGAA TCAGATAAAG ATATTATGCA GCTTTCTGCA
AGCTTTTATA AAAACTTTAA TCTGAAAAGG GTGTACTATT CCGGCTATGT ACCGATCAGT
AACGACGGAC GATTACCGGG CATTGGCAGT GCCGTGCCTA TGGTACGTGA AAACAGACTA
TACCAGACGG ATTGGCTGCT GCGCTTCTAT GGCTTTAAGG TAGATGAAAT TGTAAACGAT
CAGCATCCGA ATCTGGATCT GGATATTGAT CCGAAATTAA GCTGGGCACT GCGCAACCTA
AATGTTTTTC CTATTGATAT AAACAAGGCC GACATTCAGC TAATCCTTCG TGTACCGGGC
ATAGGCCTTC AATCTGCACA AAAAATTACT GCAGCGCGAA AGTTTCAGAA ATTAAATTGG
GAACATCTGA AGAAGATCGG TATTGCGGTA AACCGTGCAA AGTATTTTAT TACCTGCAGC
AGCAGCGAGT TTGAGCGCAG GGATTTAACG GAGGCACGCA TCAAACAGTT TATATTGTCG
GGTTCAAGTT CCAAATATTT AAAAACTGCC AGCCAGCAAT TAGTCCTTTT CTGA
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| Protein sequence | MSDSIQEKLQ ILADAAKYDV SCSSSGSKRK NHNKGLGDTG NGICHTYTED GRCVSLLKIL
LTNVCIYDCA YCVTRKSNDI QRAAFTVQEV VDLTINFYRR NYIEGLFLSS GIFKNADYTM
ERLVLIAKKL RTEHRFNGYI HLKSIPGASD EIMHEAGLYA DRLSINIEIP TETGLKLLAP
DKNRTDMIQP MTYLKNEIIL KQDEKKLFKK APVFAPAGQS TQMIIGAAKE SDKDIMQLSA
SFYKNFNLKR VYYSGYVPIS NDGRLPGIGS AVPMVRENRL YQTDWLLRFY GFKVDEIVND
QHPNLDLDID PKLSWALRNL NVFPIDINKA DIQLILRVPG IGLQSAQKIT AARKFQKLNW
EHLKKIGIAV NRAKYFITCS SSEFERRDLT EARIKQFILS GSSSKYLKTA SQQLVLF
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